RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SSPOA2VEC9 5147 aa3.4□□□□□ -1.86
USB1-216ENST00000624720 MT1XP80297 61 aa3.4□□□□□ -1.86
USB1-216ENST00000624720 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
USB1-216ENST00000624720 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
USB1-216ENST00000624720 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
USB1-216ENST00000624720 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
USB1-216ENST00000624720 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
USB1-216ENST00000624720 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
USB1-216ENST00000624720 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
USB1-216ENST00000624720 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
USB1-216ENST00000624720 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
USB1-216ENST00000624720 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
USB1-216ENST00000624720 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
USB1-216ENST00000624720 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
USB1-216ENST00000624720 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
USB1-216ENST00000624720 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
USB1-216ENST00000624720 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
USB1-216ENST00000624720 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
USB1-216ENST00000624720 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
USB1-216ENST00000624720 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
USB1-216ENST00000624720 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
USB1-216ENST00000624720 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
USB1-216ENST00000624720 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
USB1-216ENST00000624720 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.91
USB1-216ENST00000624720 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
USB1-216ENST00000624720 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
USB1-216ENST00000624720 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
USB1-216ENST00000624720 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
USB1-216ENST00000624720 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
USB1-216ENST00000624720 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
USB1-216ENST00000624720 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
USB1-216ENST00000624720 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
USB1-216ENST00000624720 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
USB1-216ENST00000624720 MT1EP04732 61 aa2.95□□□□□ -1.94
USB1-216ENST00000624720 MT1LQ93083 61 aa2.91□□□□□ -1.94
USB1-216ENST00000624720 NEBP20929 6669 aa2.9□□□□□ -1.95
USB1-216ENST00000624720 PRM1P04553 51 aa2.89□□□□□ -1.95
USB1-216ENST00000624720 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
USB1-216ENST00000624720 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
USB1-216ENST00000624720 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
USB1-216ENST00000624720 MT1GP13640 62 aa2.84□□□□□ -1.96
USB1-216ENST00000624720 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
USB1-216ENST00000624720 SPRR2EP22531 72 aa2.79□□□□□ -1.96
USB1-216ENST00000624720 SPRR2BP35325 72 aa2.79□□□□□ -1.96
USB1-216ENST00000624720 SPRR2AP35326 72 aa2.79□□□□□ -1.96
USB1-216ENST00000624720 MT1MQ8N339 61 aa2.79□□□□□ -1.96
USB1-216ENST00000624720 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
USB1-216ENST00000624720 MT3P25713 68 aa2.75□□□□□ -1.97
USB1-216ENST00000624720 SPRR2DP22532 72 aa2.71□□□□□ -1.98
USB1-216ENST00000624720 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
USB1-216ENST00000624720 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
USB1-216ENST00000624720 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
USB1-216ENST00000624720 MT1AP04731 61 aa2.51□□□□□ -2.01
USB1-216ENST00000624720 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
USB1-216ENST00000624720 MT4P47944 62 aa2.45□□□□□ -2.02
USB1-216ENST00000624720 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
USB1-216ENST00000624720 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
USB1-216ENST00000624720 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
USB1-216ENST00000624720 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
USB1-216ENST00000624720 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
USB1-216ENST00000624720 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
USB1-216ENST00000624720 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
USB1-216ENST00000624720 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
USB1-216ENST00000624720 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
USB1-216ENST00000624720 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
USB1-216ENST00000624720 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
USB1-216ENST00000624720 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
USB1-216ENST00000624720 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
USB1-216ENST00000624720 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
USB1-216ENST00000624720 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
USB1-216ENST00000624720 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
USB1-216ENST00000624720 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
USB1-216ENST00000624720 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
USB1-216ENST00000624720 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
USB1-216ENST00000624720 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
USB1-216ENST00000624720 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
USB1-216ENST00000624720 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
USB1-216ENST00000624720 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 74.8 ms