RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
C3orf56-201ENST00000624688 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
C3orf56-201ENST00000624688 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
C3orf56-201ENST00000624688 MT1EP04732 61 aa4.75□□□□□ -1.65
C3orf56-201ENST00000624688 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
C3orf56-201ENST00000624688 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
C3orf56-201ENST00000624688 MT1LQ93083 61 aa4.69□□□□□ -1.66
C3orf56-201ENST00000624688 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
C3orf56-201ENST00000624688 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
C3orf56-201ENST00000624688 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
C3orf56-201ENST00000624688 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
C3orf56-201ENST00000624688 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
C3orf56-201ENST00000624688 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
C3orf56-201ENST00000624688 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
C3orf56-201ENST00000624688 MT1GP13640 62 aa4.48□□□□□ -1.69
C3orf56-201ENST00000624688 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
C3orf56-201ENST00000624688 MT1MQ8N339 61 aa4.46□□□□□ -1.69
C3orf56-201ENST00000624688 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
C3orf56-201ENST00000624688 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
C3orf56-201ENST00000624688 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
C3orf56-201ENST00000624688 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
C3orf56-201ENST00000624688 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
C3orf56-201ENST00000624688 INE1O15225 51 aa4.3□□□□□ -1.72
C3orf56-201ENST00000624688 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
C3orf56-201ENST00000624688 SPRR2EP22531 72 aa4.24□□□□□ -1.73
C3orf56-201ENST00000624688 SPRR2BP35325 72 aa4.24□□□□□ -1.73
C3orf56-201ENST00000624688 SPRR2AP35326 72 aa4.24□□□□□ -1.73
C3orf56-201ENST00000624688 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
C3orf56-201ENST00000624688 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
C3orf56-201ENST00000624688 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
C3orf56-201ENST00000624688 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
C3orf56-201ENST00000624688 NEBP20929 6669 aa4.12□□□□□ -1.75
C3orf56-201ENST00000624688 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
C3orf56-201ENST00000624688 SPRR2DP22532 72 aa4.07□□□□□ -1.76
C3orf56-201ENST00000624688 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
C3orf56-201ENST00000624688 MT3P25713 68 aa4.02□□□□□ -1.77
C3orf56-201ENST00000624688 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
C3orf56-201ENST00000624688 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
C3orf56-201ENST00000624688 MT1AP04731 61 aa3.97□□□□□ -1.77
C3orf56-201ENST00000624688 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
C3orf56-201ENST00000624688 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
C3orf56-201ENST00000624688 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
C3orf56-201ENST00000624688 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.8
C3orf56-201ENST00000624688 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
C3orf56-201ENST00000624688 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
C3orf56-201ENST00000624688 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
C3orf56-201ENST00000624688 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
C3orf56-201ENST00000624688 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
C3orf56-201ENST00000624688 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
C3orf56-201ENST00000624688 MT4P47944 62 aa3.55□□□□□ -1.84
C3orf56-201ENST00000624688 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
C3orf56-201ENST00000624688 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
C3orf56-201ENST00000624688 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
C3orf56-201ENST00000624688 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
C3orf56-201ENST00000624688 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
C3orf56-201ENST00000624688 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
C3orf56-201ENST00000624688 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
C3orf56-201ENST00000624688 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
C3orf56-201ENST00000624688 PRM1P04553 51 aa3.13□□□□□ -1.91
C3orf56-201ENST00000624688 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
C3orf56-201ENST00000624688 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
C3orf56-201ENST00000624688 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
C3orf56-201ENST00000624688 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
C3orf56-201ENST00000624688 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
C3orf56-201ENST00000624688 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
C3orf56-201ENST00000624688 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
C3orf56-201ENST00000624688 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
C3orf56-201ENST00000624688 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
C3orf56-201ENST00000624688 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
C3orf56-201ENST00000624688 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
C3orf56-201ENST00000624688 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
C3orf56-201ENST00000624688 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
C3orf56-201ENST00000624688 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
C3orf56-201ENST00000624688 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
C3orf56-201ENST00000624688 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
C3orf56-201ENST00000624688 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
C3orf56-201ENST00000624688 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 48.2 ms