RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
ATRX-216ENST00000624403 USH2AO75445 5202 aa4.24□□□□□ -1.73
ATRX-216ENST00000624403 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
ATRX-216ENST00000624403 TNP1P09430 55 aa4.22□□□□□ -1.73
ATRX-216ENST00000624403 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
ATRX-216ENST00000624403 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
ATRX-216ENST00000624403 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
ATRX-216ENST00000624403 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
ATRX-216ENST00000624403 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
ATRX-216ENST00000624403 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
ATRX-216ENST00000624403 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
ATRX-216ENST00000624403 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
ATRX-216ENST00000624403 SSPOA2VEC9 5147 aa4.09□□□□□ -1.76
ATRX-216ENST00000624403 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
ATRX-216ENST00000624403 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
ATRX-216ENST00000624403 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
ATRX-216ENST00000624403 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
ATRX-216ENST00000624403 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
ATRX-216ENST00000624403 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
ATRX-216ENST00000624403 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
ATRX-216ENST00000624403 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
ATRX-216ENST00000624403 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
ATRX-216ENST00000624403 KMT2DO14686 5537 aa3.84□□□□□ -1.79
ATRX-216ENST00000624403 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
ATRX-216ENST00000624403 MT1EP04732 61 aa3.75□□□□□ -1.81
ATRX-216ENST00000624403 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
ATRX-216ENST00000624403 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
ATRX-216ENST00000624403 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
ATRX-216ENST00000624403 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
ATRX-216ENST00000624403 MT1LQ93083 61 aa3.67□□□□□ -1.82
ATRX-216ENST00000624403 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
ATRX-216ENST00000624403 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
ATRX-216ENST00000624403 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
ATRX-216ENST00000624403 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
ATRX-216ENST00000624403 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
ATRX-216ENST00000624403 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
ATRX-216ENST00000624403 MT1GP13640 62 aa3.54□□□□□ -1.84
ATRX-216ENST00000624403 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
ATRX-216ENST00000624403 MT1MQ8N339 61 aa3.53□□□□□ -1.84
ATRX-216ENST00000624403 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
ATRX-216ENST00000624403 SPRR2EP22531 72 aa3.46□□□□□ -1.86
ATRX-216ENST00000624403 SPRR2BP35325 72 aa3.46□□□□□ -1.86
ATRX-216ENST00000624403 SPRR2AP35326 72 aa3.46□□□□□ -1.86
ATRX-216ENST00000624403 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
ATRX-216ENST00000624403 SPRR2DP22532 72 aa3.33□□□□□ -1.88
ATRX-216ENST00000624403 NEBP20929 6669 aa3.32□□□□□ -1.88
ATRX-216ENST00000624403 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
ATRX-216ENST00000624403 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
ATRX-216ENST00000624403 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
ATRX-216ENST00000624403 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
ATRX-216ENST00000624403 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
ATRX-216ENST00000624403 MT1AP04731 61 aa3.12□□□□□ -1.91
ATRX-216ENST00000624403 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
ATRX-216ENST00000624403 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
ATRX-216ENST00000624403 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
ATRX-216ENST00000624403 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
ATRX-216ENST00000624403 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
ATRX-216ENST00000624403 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
ATRX-216ENST00000624403 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
ATRX-216ENST00000624403 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
ATRX-216ENST00000624403 MT4P47944 62 aa2.89□□□□□ -1.95
ATRX-216ENST00000624403 INE1O15225 51 aa2.86□□□□□ -1.95
ATRX-216ENST00000624403 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
ATRX-216ENST00000624403 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
ATRX-216ENST00000624403 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
ATRX-216ENST00000624403 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
ATRX-216ENST00000624403 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
ATRX-216ENST00000624403 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
ATRX-216ENST00000624403 PRM1P04553 51 aa2.34□□□□□ -2.03
ATRX-216ENST00000624403 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
ATRX-216ENST00000624403 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
ATRX-216ENST00000624403 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
ATRX-216ENST00000624403 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
ATRX-216ENST00000624403 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
ATRX-216ENST00000624403 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
ATRX-216ENST00000624403 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
ATRX-216ENST00000624403 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
ATRX-216ENST00000624403 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms