RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
DDB2-216ENST00000622878 MT1MQ8N339 61 aa5.68□□□□□ -1.5
DDB2-216ENST00000622878 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
DDB2-216ENST00000622878 TNP1P09430 55 aa5.66□□□□□ -1.5
DDB2-216ENST00000622878 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
DDB2-216ENST00000622878 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
DDB2-216ENST00000622878 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
DDB2-216ENST00000622878 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
DDB2-216ENST00000622878 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
DDB2-216ENST00000622878 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
DDB2-216ENST00000622878 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
DDB2-216ENST00000622878 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
DDB2-216ENST00000622878 UQCR11O14957 56 aa5.48□□□□□ -1.53
DDB2-216ENST00000622878 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
DDB2-216ENST00000622878 MT4P47944 62 aa5.47□□□□□ -1.53
DDB2-216ENST00000622878 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
DDB2-216ENST00000622878 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
DDB2-216ENST00000622878 Q1T7F1 81 aa5.45□□□□□ -1.54
DDB2-216ENST00000622878 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
DDB2-216ENST00000622878 PSPHP1O15172 72 aa5.41□□□□□ -1.54
DDB2-216ENST00000622878 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
DDB2-216ENST00000622878 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
DDB2-216ENST00000622878 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
DDB2-216ENST00000622878 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
DDB2-216ENST00000622878 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
DDB2-216ENST00000622878 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
DDB2-216ENST00000622878 A6NED7 52 aa5.26□□□□□ -1.57
DDB2-216ENST00000622878 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
DDB2-216ENST00000622878 K7ERS5 55 aa5.21□□□□□ -1.58
DDB2-216ENST00000622878 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
DDB2-216ENST00000622878 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
DDB2-216ENST00000622878 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
DDB2-216ENST00000622878 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
DDB2-216ENST00000622878 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
DDB2-216ENST00000622878 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
DDB2-216ENST00000622878 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
DDB2-216ENST00000622878 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
DDB2-216ENST00000622878 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
DDB2-216ENST00000622878 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
DDB2-216ENST00000622878 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
DDB2-216ENST00000622878 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
DDB2-216ENST00000622878 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
DDB2-216ENST00000622878 ROMO1P60602 79 aa4.9□□□□□ -1.63
DDB2-216ENST00000622878 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
DDB2-216ENST00000622878 MT1AP04731 61 aa4.84□□□□□ -1.63
DDB2-216ENST00000622878 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
DDB2-216ENST00000622878 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
DDB2-216ENST00000622878 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
DDB2-216ENST00000622878 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
DDB2-216ENST00000622878 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
DDB2-216ENST00000622878 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
DDB2-216ENST00000622878 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
DDB2-216ENST00000622878 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
DDB2-216ENST00000622878 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
DDB2-216ENST00000622878 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
DDB2-216ENST00000622878 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
DDB2-216ENST00000622878 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
DDB2-216ENST00000622878 MT3P25713 68 aa4.41□□□□□ -1.7
DDB2-216ENST00000622878 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
DDB2-216ENST00000622878 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
DDB2-216ENST00000622878 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
DDB2-216ENST00000622878 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
DDB2-216ENST00000622878 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
DDB2-216ENST00000622878 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
DDB2-216ENST00000622878 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
DDB2-216ENST00000622878 INE1O15225 51 aa3.69□□□□□ -1.82
DDB2-216ENST00000622878 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
DDB2-216ENST00000622878 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
DDB2-216ENST00000622878 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
DDB2-216ENST00000622878 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
DDB2-216ENST00000622878 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
DDB2-216ENST00000622878 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
DDB2-216ENST00000622878 PHGR1C9JFL3 82 aa3□□□□□ -1.93
DDB2-216ENST00000622878 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
DDB2-216ENST00000622878 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
DDB2-216ENST00000622878 PRM1P04553 51 aa2.5□□□□□ -2.01
DDB2-216ENST00000622878 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
DDB2-216ENST00000622878 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms