RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
CLTCL1-212ENST00000622493 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
CLTCL1-212ENST00000622493 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.6
CLTCL1-212ENST00000622493 MT1LQ93083 61 aa5.07□□□□□ -1.6
CLTCL1-212ENST00000622493 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
CLTCL1-212ENST00000622493 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
CLTCL1-212ENST00000622493 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
CLTCL1-212ENST00000622493 INE1O15225 51 aa5.01□□□□□ -1.61
CLTCL1-212ENST00000622493 MT1GP13640 62 aa5□□□□□ -1.61
CLTCL1-212ENST00000622493 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
CLTCL1-212ENST00000622493 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
CLTCL1-212ENST00000622493 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
CLTCL1-212ENST00000622493 SPRR2EP22531 72 aa4.94□□□□□ -1.62
CLTCL1-212ENST00000622493 SPRR2BP35325 72 aa4.94□□□□□ -1.62
CLTCL1-212ENST00000622493 SPRR2AP35326 72 aa4.94□□□□□ -1.62
CLTCL1-212ENST00000622493 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CLTCL1-212ENST00000622493 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CLTCL1-212ENST00000622493 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
CLTCL1-212ENST00000622493 SPRR2DP22532 72 aa4.76□□□□□ -1.65
CLTCL1-212ENST00000622493 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
CLTCL1-212ENST00000622493 NEBP20929 6669 aa4.69□□□□□ -1.66
CLTCL1-212ENST00000622493 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
CLTCL1-212ENST00000622493 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
CLTCL1-212ENST00000622493 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
CLTCL1-212ENST00000622493 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
CLTCL1-212ENST00000622493 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
CLTCL1-212ENST00000622493 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
CLTCL1-212ENST00000622493 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
CLTCL1-212ENST00000622493 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
CLTCL1-212ENST00000622493 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
CLTCL1-212ENST00000622493 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
CLTCL1-212ENST00000622493 MT1AP04731 61 aa4.32□□□□□ -1.72
CLTCL1-212ENST00000622493 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
CLTCL1-212ENST00000622493 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
CLTCL1-212ENST00000622493 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
CLTCL1-212ENST00000622493 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
CLTCL1-212ENST00000622493 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
CLTCL1-212ENST00000622493 MT4P47944 62 aa4.11□□□□□ -1.75
CLTCL1-212ENST00000622493 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
CLTCL1-212ENST00000622493 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.76
CLTCL1-212ENST00000622493 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
CLTCL1-212ENST00000622493 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
CLTCL1-212ENST00000622493 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CLTCL1-212ENST00000622493 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
CLTCL1-212ENST00000622493 MT3P25713 68 aa3.94□□□□□ -1.78
CLTCL1-212ENST00000622493 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
CLTCL1-212ENST00000622493 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
CLTCL1-212ENST00000622493 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CLTCL1-212ENST00000622493 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
CLTCL1-212ENST00000622493 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
CLTCL1-212ENST00000622493 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CLTCL1-212ENST00000622493 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CLTCL1-212ENST00000622493 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
CLTCL1-212ENST00000622493 PRM1P04553 51 aa3.47□□□□□ -1.85
CLTCL1-212ENST00000622493 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
CLTCL1-212ENST00000622493 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
CLTCL1-212ENST00000622493 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.87
CLTCL1-212ENST00000622493 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
CLTCL1-212ENST00000622493 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
CLTCL1-212ENST00000622493 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
CLTCL1-212ENST00000622493 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
CLTCL1-212ENST00000622493 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CLTCL1-212ENST00000622493 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
CLTCL1-212ENST00000622493 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
CLTCL1-212ENST00000622493 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
CLTCL1-212ENST00000622493 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
CLTCL1-212ENST00000622493 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
CLTCL1-212ENST00000622493 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
CLTCL1-212ENST00000622493 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
CLTCL1-212ENST00000622493 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CLTCL1-212ENST00000622493 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
CLTCL1-212ENST00000622493 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
CLTCL1-212ENST00000622493 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CLTCL1-212ENST00000622493 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CLTCL1-212ENST00000622493 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CLTCL1-212ENST00000622493 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CLTCL1-212ENST00000622493 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 49.7 ms