RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
AGAP3-226ENST00000622464 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
AGAP3-226ENST00000622464 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
AGAP3-226ENST00000622464 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
AGAP3-226ENST00000622464 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
AGAP3-226ENST00000622464 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
AGAP3-226ENST00000622464 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
AGAP3-226ENST00000622464 MDN1Q9NU22 5596 aa4.4□□□□□ -1.71
AGAP3-226ENST00000622464 MT1GP13640 62 aa4.37□□□□□ -1.71
AGAP3-226ENST00000622464 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
AGAP3-226ENST00000622464 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
AGAP3-226ENST00000622464 MT1MQ8N339 61 aa4.34□□□□□ -1.72
AGAP3-226ENST00000622464 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
AGAP3-226ENST00000622464 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
AGAP3-226ENST00000622464 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
AGAP3-226ENST00000622464 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
AGAP3-226ENST00000622464 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
AGAP3-226ENST00000622464 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
AGAP3-226ENST00000622464 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
AGAP3-226ENST00000622464 SPRR2EP22531 72 aa4.07□□□□□ -1.76
AGAP3-226ENST00000622464 SPRR2BP35325 72 aa4.07□□□□□ -1.76
AGAP3-226ENST00000622464 SPRR2AP35326 72 aa4.07□□□□□ -1.76
AGAP3-226ENST00000622464 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
AGAP3-226ENST00000622464 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
AGAP3-226ENST00000622464 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
AGAP3-226ENST00000622464 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
AGAP3-226ENST00000622464 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
AGAP3-226ENST00000622464 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
AGAP3-226ENST00000622464 SPRR2DP22532 72 aa3.88□□□□□ -1.79
AGAP3-226ENST00000622464 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
AGAP3-226ENST00000622464 MT1AP04731 61 aa3.79□□□□□ -1.8
AGAP3-226ENST00000622464 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
AGAP3-226ENST00000622464 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
AGAP3-226ENST00000622464 NEBP20929 6669 aa3.67□□□□□ -1.82
AGAP3-226ENST00000622464 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
AGAP3-226ENST00000622464 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
AGAP3-226ENST00000622464 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
AGAP3-226ENST00000622464 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
AGAP3-226ENST00000622464 PRM1P04553 51 aa3.57□□□□□ -1.84
AGAP3-226ENST00000622464 MT4P47944 62 aa3.53□□□□□ -1.84
AGAP3-226ENST00000622464 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
AGAP3-226ENST00000622464 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
AGAP3-226ENST00000622464 MT3P25713 68 aa3.42□□□□□ -1.86
AGAP3-226ENST00000622464 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
AGAP3-226ENST00000622464 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
AGAP3-226ENST00000622464 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
AGAP3-226ENST00000622464 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.88
AGAP3-226ENST00000622464 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
AGAP3-226ENST00000622464 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
AGAP3-226ENST00000622464 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
AGAP3-226ENST00000622464 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
AGAP3-226ENST00000622464 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
AGAP3-226ENST00000622464 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
AGAP3-226ENST00000622464 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
AGAP3-226ENST00000622464 MUC5ACP98088 5654 aa3□□□□□ -1.93
AGAP3-226ENST00000622464 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
AGAP3-226ENST00000622464 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
AGAP3-226ENST00000622464 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
AGAP3-226ENST00000622464 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
AGAP3-226ENST00000622464 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
AGAP3-226ENST00000622464 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
AGAP3-226ENST00000622464 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
AGAP3-226ENST00000622464 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
AGAP3-226ENST00000622464 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
AGAP3-226ENST00000622464 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
AGAP3-226ENST00000622464 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
AGAP3-226ENST00000622464 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
AGAP3-226ENST00000622464 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
AGAP3-226ENST00000622464 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
AGAP3-226ENST00000622464 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
AGAP3-226ENST00000622464 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
AGAP3-226ENST00000622464 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
AGAP3-226ENST00000622464 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
AGAP3-226ENST00000622464 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
AGAP3-226ENST00000622464 PHGR1C9JFL3 82 aa2□□□□□ -2.09
AGAP3-226ENST00000622464 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
AGAP3-226ENST00000622464 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms