RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
ABCB1-211ENST00000622132 MT1EP04732 61 aa3□□□□□ -1.93
ABCB1-211ENST00000622132 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
ABCB1-211ENST00000622132 MT1LQ93083 61 aa2.96□□□□□ -1.94
ABCB1-211ENST00000622132 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.92□□□□□ -1.94
ABCB1-211ENST00000622132 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
ABCB1-211ENST00000622132 KRTAP9-7A8MTY7 169 aa2.92□□□□□ -1.94
ABCB1-211ENST00000622132 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
ABCB1-211ENST00000622132 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.94
ABCB1-211ENST00000622132 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
ABCB1-211ENST00000622132 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
ABCB1-211ENST00000622132 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
ABCB1-211ENST00000622132 MT1MQ8N339 61 aa2.87□□□□□ -1.95
ABCB1-211ENST00000622132 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
ABCB1-211ENST00000622132 KMT2DO14686 5537 aa2.81□□□□□ -1.96
ABCB1-211ENST00000622132 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
ABCB1-211ENST00000622132 MT3P25713 68 aa2.8□□□□□ -1.96
ABCB1-211ENST00000622132 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
ABCB1-211ENST00000622132 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
ABCB1-211ENST00000622132 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
ABCB1-211ENST00000622132 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
ABCB1-211ENST00000622132 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
ABCB1-211ENST00000622132 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
ABCB1-211ENST00000622132 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
ABCB1-211ENST00000622132 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
ABCB1-211ENST00000622132 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
ABCB1-211ENST00000622132 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
ABCB1-211ENST00000622132 MT4P47944 62 aa2.67□□□□□ -1.98
ABCB1-211ENST00000622132 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
ABCB1-211ENST00000622132 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
ABCB1-211ENST00000622132 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
ABCB1-211ENST00000622132 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
ABCB1-211ENST00000622132 MT1AP04731 61 aa2.58□□□□□ -2
ABCB1-211ENST00000622132 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
ABCB1-211ENST00000622132 MDN1Q9NU22 5596 aa2.57□□□□□ -2
ABCB1-211ENST00000622132 PRM1P04553 51 aa2.55□□□□□ -2
ABCB1-211ENST00000622132 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
ABCB1-211ENST00000622132 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
ABCB1-211ENST00000622132 KRTAP4-9Q9BYQ8 210 aa2.51□□□□□ -2.01
ABCB1-211ENST00000622132 NEBP20929 6669 aa2.5□□□□□ -2.01
ABCB1-211ENST00000622132 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
ABCB1-211ENST00000622132 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
ABCB1-211ENST00000622132 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
ABCB1-211ENST00000622132 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
ABCB1-211ENST00000622132 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
ABCB1-211ENST00000622132 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
ABCB1-211ENST00000622132 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
ABCB1-211ENST00000622132 LCE1DQ5T752 114 aa2.34□□□□□ -2.04
ABCB1-211ENST00000622132 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
ABCB1-211ENST00000622132 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
ABCB1-211ENST00000622132 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
ABCB1-211ENST00000622132 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
ABCB1-211ENST00000622132 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
ABCB1-211ENST00000622132 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
ABCB1-211ENST00000622132 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
ABCB1-211ENST00000622132 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
ABCB1-211ENST00000622132 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
ABCB1-211ENST00000622132 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
ABCB1-211ENST00000622132 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
ABCB1-211ENST00000622132 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
ABCB1-211ENST00000622132 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
ABCB1-211ENST00000622132 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
ABCB1-211ENST00000622132 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
ABCB1-211ENST00000622132 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
ABCB1-211ENST00000622132 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
ABCB1-211ENST00000622132 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
ABCB1-211ENST00000622132 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
ABCB1-211ENST00000622132 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
ABCB1-211ENST00000622132 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
ABCB1-211ENST00000622132 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
ABCB1-211ENST00000622132 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
ABCB1-211ENST00000622132 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
ABCB1-211ENST00000622132 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
ABCB1-211ENST00000622132 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
ABCB1-211ENST00000622132 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
ABCB1-211ENST00000622132 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
ABCB1-211ENST00000622132 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms