RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
CPNE3-211ENST00000621526 LCE1EQ5T753 118 aa0.69□□□□□ -2.3
CPNE3-211ENST00000621526 TRAV7A0A075B6U4 112 aa0.68□□□□□ -2.3
CPNE3-211ENST00000621526 H0Y9P7 68 aa0.67□□□□□ -2.3
CPNE3-211ENST00000621526 ACYP2P14621 99 aa0.67□□□□□ -2.3
CPNE3-211ENST00000621526 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
CPNE3-211ENST00000621526 Q8N9L7 120 aa0.67□□□□□ -2.3
CPNE3-211ENST00000621526 SPANXA2-OT1Q8N9U9 137 aa0.67□□□□□ -2.3
CPNE3-211ENST00000621526 A0A1B0GV90 55 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 CHKB-CPT1BH3BT56 60 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 MT3P25713 68 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 SEC61GP60059 68 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 DMAC1Q96GE9 116 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 LINC00208Q96KT6 92 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 OCR1Q9BZK8 76 aa0.66□□□□□ -2.3
CPNE3-211ENST00000621526 ATP5EP56381 51 aaPredicted RBP0.65□□□□□ -2.31
CPNE3-211ENST00000621526 KRTAP12-3P60328 96 aa0.65□□□□□ -2.31
CPNE3-211ENST00000621526 SERP2Q8N6R1 65 aa0.65□□□□□ -2.31
CPNE3-211ENST00000621526 LCE1FQ5T754 118 aa0.64□□□□□ -2.31
CPNE3-211ENST00000621526 PRR15LQ9BU68 103 aa0.64□□□□□ -2.31
CPNE3-211ENST00000621526 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
CPNE3-211ENST00000621526 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 TNP1P09430 55 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 COX7CP15954 63 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 LCE1CQ5T751 118 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 LCE1BQ5T7P3 118 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 KRTAP5-11Q6L8G4 156 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 V9GYY9 64 aa0.63□□□□□ -2.31
CPNE3-211ENST00000621526 SMIM26A0A096LP01 95 aa0.62□□□□□ -2.31
CPNE3-211ENST00000621526 ANAPC13Q9BS18 74 aa0.62□□□□□ -2.31
CPNE3-211ENST00000621526 K7ERS5 55 aa0.61□□□□□ -2.31
CPNE3-211ENST00000621526 TMEM258P61165 79 aa0.61□□□□□ -2.31
CPNE3-211ENST00000621526 KRTAP4-12Q9BQ66 201 aa0.61□□□□□ -2.31
CPNE3-211ENST00000621526 A0A1B0GU33 70 aa0.6□□□□□ -2.31
CPNE3-211ENST00000621526 A0A1B0GU69 56 aa0.6□□□□□ -2.31
CPNE3-211ENST00000621526 KRTAP13-4Q3LI77 160 aa0.6□□□□□ -2.31
CPNE3-211ENST00000621526 COA5Q86WW8 74 aa0.6□□□□□ -2.31
CPNE3-211ENST00000621526 SNURFQ9Y675 71 aa0.6□□□□□ -2.31
CPNE3-211ENST00000621526 H7BZZ5 65 aa0.59□□□□□ -2.31
CPNE3-211ENST00000621526 UQCR11O14957 56 aa0.59□□□□□ -2.31
CPNE3-211ENST00000621526 KRTAP25-1Q3LHN0 102 aa0.59□□□□□ -2.31
CPNE3-211ENST00000621526 LCE3CQ5T5A8 94 aa0.59□□□□□ -2.31
CPNE3-211ENST00000621526 SPINT4Q6UDR6 99 aa0.59□□□□□ -2.31
CPNE3-211ENST00000621526 RPS28P62857 69 aaKnown RBP0.58□□□□□ -2.32
CPNE3-211ENST00000621526 LINC01558Q9Y6Z2 57 aa0.58□□□□□ -2.32
CPNE3-211ENST00000621526 KRTAP23-1A1A580 65 aa0.57□□□□□ -2.32
CPNE3-211ENST00000621526 KRTAP12-1P59990 96 aa0.57□□□□□ -2.32
CPNE3-211ENST00000621526 Q1T7F1 81 aa0.57□□□□□ -2.32
CPNE3-211ENST00000621526 CCDC179H3BU77 68 aa0.55□□□□□ -2.32
CPNE3-211ENST00000621526 MIR22HGQ0VDD5 57 aa0.55□□□□□ -2.32
CPNE3-211ENST00000621526 KRTAP15-1Q3LI76 137 aa0.55□□□□□ -2.32
CPNE3-211ENST00000621526 SPATA8Q6RVD6 105 aa0.55□□□□□ -2.32
CPNE3-211ENST00000621526 MUC19Q7Z5P9 8384 aa0.54□□□□□ -2.32
CPNE3-211ENST00000621526 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.54□□□□□ -2.32
CPNE3-211ENST00000621526 CDC42SE1Q9NRR8 79 aa0.54□□□□□ -2.32
CPNE3-211ENST00000621526 A6NED7 52 aa0.53□□□□□ -2.32
CPNE3-211ENST00000621526 KRTAP9-6A8MVA2 160 aa0.53□□□□□ -2.32
CPNE3-211ENST00000621526 PCP4P48539 62 aa0.53□□□□□ -2.32
CPNE3-211ENST00000621526 PSPHP1O15172 72 aa0.51□□□□□ -2.33
CPNE3-211ENST00000621526 ROMO1P60602 79 aa0.51□□□□□ -2.33
CPNE3-211ENST00000621526 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
CPNE3-211ENST00000621526 BRK1Q8WUW1 75 aa0.51□□□□□ -2.33
CPNE3-211ENST00000621526 A8MU10 97 aa0.5□□□□□ -2.33
CPNE3-211ENST00000621526 PMAIP1Q13794 54 aa0.47□□□□□ -2.33
CPNE3-211ENST00000621526 KRTAP21-2Q3LI59 83 aa0.47□□□□□ -2.33
CPNE3-211ENST00000621526 PRO0628Q9UI54 55 aa0.46□□□□□ -2.34
CPNE3-211ENST00000621526 LUZP6Q538Z0 58 aa0.43□□□□□ -2.34
CPNE3-211ENST00000621526 KTN1-AS1Q86SY8 53 aa0.42□□□□□ -2.34
CPNE3-211ENST00000621526 LCE3DQ9BYE3 92 aa0.39□□□□□ -2.35
CPNE3-211ENST00000621526 SVIPQ8NHG7 77 aa0.38□□□□□ -2.35
CPNE3-211ENST00000621526 PRAC1Q96KF2 57 aa0.36□□□□□ -2.35
CPNE3-211ENST00000621526 MUC16Q8WXI7 14507 aa0.35□□□□□ -2.35
CPNE3-211ENST00000621526 LCE3EQ5T5B0 92 aa0.34□□□□□ -2.36
CPNE3-211ENST00000621526 A0A0A0MQY5 61 aa0.32□□□□□ -2.36
CPNE3-211ENST00000621526 INE1O15225 51 aa0.32□□□□□ -2.36
CPNE3-211ENST00000621526 NDUFAF8A1L188 74 aa0.29□□□□□ -2.36
CPNE3-211ENST00000621526 PRM1P04553 51 aa0.23□□□□□ -2.37
CPNE3-211ENST00000621526 H3BS24 57 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 39.3 ms