RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
PTPDC1-204ENST00000620992 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
PTPDC1-204ENST00000620992 SPRR2DP22532 72 aa2.91□□□□□ -1.94
PTPDC1-204ENST00000620992 LCE2AQ5TA79 106 aaPredicted RBP2.88□□□□□ -1.95
PTPDC1-204ENST00000620992 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
PTPDC1-204ENST00000620992 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
PTPDC1-204ENST00000620992 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
PTPDC1-204ENST00000620992 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.96
PTPDC1-204ENST00000620992 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
PTPDC1-204ENST00000620992 MT1LQ93083 61 aa2.77□□□□□ -1.97
PTPDC1-204ENST00000620992 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
PTPDC1-204ENST00000620992 MT1EP04732 61 aa2.76□□□□□ -1.97
PTPDC1-204ENST00000620992 MT4P47944 62 aa2.75□□□□□ -1.97
PTPDC1-204ENST00000620992 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
PTPDC1-204ENST00000620992 LCE2DQ5TA82 110 aaPredicted RBP2.74□□□□□ -1.97
PTPDC1-204ENST00000620992 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
PTPDC1-204ENST00000620992 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
PTPDC1-204ENST00000620992 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
PTPDC1-204ENST00000620992 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
PTPDC1-204ENST00000620992 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
PTPDC1-204ENST00000620992 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
PTPDC1-204ENST00000620992 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
PTPDC1-204ENST00000620992 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
PTPDC1-204ENST00000620992 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
PTPDC1-204ENST00000620992 KRTAP9-6A0A140TA67 174 aa2.65□□□□□ -1.99
PTPDC1-204ENST00000620992 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
PTPDC1-204ENST00000620992 MT1MQ8N339 61 aa2.59□□□□□ -1.99
PTPDC1-204ENST00000620992 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
PTPDC1-204ENST00000620992 LCE1DQ5T752 114 aa2.56□□□□□ -2
PTPDC1-204ENST00000620992 KRTAP9-7A8MTY7 169 aa2.55□□□□□ -2
PTPDC1-204ENST00000620992 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
PTPDC1-204ENST00000620992 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
PTPDC1-204ENST00000620992 KRTAP4-6Q9BYQ5 205 aa2.52□□□□□ -2.01
PTPDC1-204ENST00000620992 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
PTPDC1-204ENST00000620992 MT3P25713 68 aa2.46□□□□□ -2.02
PTPDC1-204ENST00000620992 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
PTPDC1-204ENST00000620992 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.44□□□□□ -2.02
PTPDC1-204ENST00000620992 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
PTPDC1-204ENST00000620992 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
PTPDC1-204ENST00000620992 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
PTPDC1-204ENST00000620992 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
PTPDC1-204ENST00000620992 PRM1P04553 51 aa2.37□□□□□ -2.03
PTPDC1-204ENST00000620992 MT1AP04731 61 aa2.35□□□□□ -2.03
PTPDC1-204ENST00000620992 NEBP20929 6669 aa2.32□□□□□ -2.04
PTPDC1-204ENST00000620992 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
PTPDC1-204ENST00000620992 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
PTPDC1-204ENST00000620992 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
PTPDC1-204ENST00000620992 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
PTPDC1-204ENST00000620992 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
PTPDC1-204ENST00000620992 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
PTPDC1-204ENST00000620992 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
PTPDC1-204ENST00000620992 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
PTPDC1-204ENST00000620992 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
PTPDC1-204ENST00000620992 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
PTPDC1-204ENST00000620992 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
PTPDC1-204ENST00000620992 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
PTPDC1-204ENST00000620992 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
PTPDC1-204ENST00000620992 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
PTPDC1-204ENST00000620992 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
PTPDC1-204ENST00000620992 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
PTPDC1-204ENST00000620992 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
PTPDC1-204ENST00000620992 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
PTPDC1-204ENST00000620992 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
PTPDC1-204ENST00000620992 KRTAP4-11Q9BYQ6 195 aa1.86□□□□□ -2.11
PTPDC1-204ENST00000620992 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
PTPDC1-204ENST00000620992 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
PTPDC1-204ENST00000620992 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
PTPDC1-204ENST00000620992 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
PTPDC1-204ENST00000620992 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
PTPDC1-204ENST00000620992 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
PTPDC1-204ENST00000620992 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
PTPDC1-204ENST00000620992 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
PTPDC1-204ENST00000620992 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
PTPDC1-204ENST00000620992 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
PTPDC1-204ENST00000620992 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
PTPDC1-204ENST00000620992 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
PTPDC1-204ENST00000620992 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 127.9 ms