RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
SRRT-218ENST00000620394 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.18
SRRT-218ENST00000620394 TNP1P09430 55 aa7.68□□□□□ -1.18
SRRT-218ENST00000620394 KRTAP5-3Q6L8H2 238 aa7.65□□□□□ -1.18
SRRT-218ENST00000620394 KRTAP4-3Q9BYR4 195 aa7.62□□□□□ -1.19
SRRT-218ENST00000620394 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
SRRT-218ENST00000620394 PRR15LQ9BU68 103 aa7.51□□□□□ -1.21
SRRT-218ENST00000620394 ATP5EP56381 51 aaPredicted RBP7.47□□□□□ -1.21
SRRT-218ENST00000620394 CCDC179H3BU77 68 aa7.44□□□□□ -1.22
SRRT-218ENST00000620394 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
SRRT-218ENST00000620394 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
SRRT-218ENST00000620394 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
SRRT-218ENST00000620394 KRTAP20-2Q3LI61 65 aa7.41□□□□□ -1.22
SRRT-218ENST00000620394 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
SRRT-218ENST00000620394 UQCR11O14957 56 aa7.27□□□□□ -1.25
SRRT-218ENST00000620394 KRTAP5-5Q701N2 237 aaPredicted RBP7.26□□□□□ -1.25
SRRT-218ENST00000620394 KRTAP12-4P60329 112 aa7.19□□□□□ -1.26
SRRT-218ENST00000620394 TMEM258P61165 79 aa7.18□□□□□ -1.26
SRRT-218ENST00000620394 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
SRRT-218ENST00000620394 MIR22HGQ0VDD5 57 aa7.07□□□□□ -1.28
SRRT-218ENST00000620394 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
SRRT-218ENST00000620394 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
SRRT-218ENST00000620394 SYNE1Q8NF91 8797 aaKnown RBP7.01□□□□□ -1.29
SRRT-218ENST00000620394 K7ERS5 55 aa6.96□□□□□ -1.3
SRRT-218ENST00000620394 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
SRRT-218ENST00000620394 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
SRRT-218ENST00000620394 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
SRRT-218ENST00000620394 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
SRRT-218ENST00000620394 V9GYY9 64 aa6.82□□□□□ -1.32
SRRT-218ENST00000620394 PSPHP1O15172 72 aa6.8□□□□□ -1.32
SRRT-218ENST00000620394 Q1T7F1 81 aa6.78□□□□□ -1.32
SRRT-218ENST00000620394 KRTAP5-2Q701N4 177 aa6.74□□□□□ -1.33
SRRT-218ENST00000620394 AHNAKQ09666 5890 aaKnown RBP6.74□□□□□ -1.33
SRRT-218ENST00000620394 MUC5ACP98088 5654 aa6.72□□□□□ -1.33
SRRT-218ENST00000620394 KRTAP5-8O75690 187 aa6.7□□□□□ -1.34
SRRT-218ENST00000620394 MT1AP04731 61 aa6.67□□□□□ -1.34
SRRT-218ENST00000620394 MUC5BQ9HC84 5762 aaPredicted RBP6.64□□□□□ -1.35
SRRT-218ENST00000620394 KRTAP6-1Q3LI64 71 aa6.63□□□□□ -1.35
SRRT-218ENST00000620394 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
SRRT-218ENST00000620394 A6NED7 52 aa6.56□□□□□ -1.36
SRRT-218ENST00000620394 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
SRRT-218ENST00000620394 ROMO1P60602 79 aa6.47□□□□□ -1.37
SRRT-218ENST00000620394 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
SRRT-218ENST00000620394 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
SRRT-218ENST00000620394 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
SRRT-218ENST00000620394 KRTAP6-2Q3LI66 62 aa6.35□□□□□ -1.39
SRRT-218ENST00000620394 OBSCNQ5VST9 7968 aa6.31□□□□□ -1.4
SRRT-218ENST00000620394 KRTAP5-1Q6L8H4 278 aa6.14□□□□□ -1.43
SRRT-218ENST00000620394 MT3P25713 68 aa6.08□□□□□ -1.44
SRRT-218ENST00000620394 PCP4P48539 62 aa5.8□□□□□ -1.48
SRRT-218ENST00000620394 LCE1EQ5T753 118 aa5.67□□□□□ -1.5
SRRT-218ENST00000620394 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
SRRT-218ENST00000620394 LCE1BQ5T7P3 118 aa5.36□□□□□ -1.55
SRRT-218ENST00000620394 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
SRRT-218ENST00000620394 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
SRRT-218ENST00000620394 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
SRRT-218ENST00000620394 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
SRRT-218ENST00000620394 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
SRRT-218ENST00000620394 KRTAP5-11Q6L8G4 156 aa4.9□□□□□ -1.63
SRRT-218ENST00000620394 LCE1FQ5T754 118 aa4.86□□□□□ -1.63
SRRT-218ENST00000620394 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
SRRT-218ENST00000620394 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
SRRT-218ENST00000620394 PHGR1C9JFL3 82 aa4.68□□□□□ -1.66
SRRT-218ENST00000620394 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
SRRT-218ENST00000620394 KRTAP21-2Q3LI59 83 aa4.39□□□□□ -1.71
SRRT-218ENST00000620394 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
SRRT-218ENST00000620394 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
SRRT-218ENST00000620394 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
SRRT-218ENST00000620394 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
SRRT-218ENST00000620394 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
SRRT-218ENST00000620394 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SRRT-218ENST00000620394 KRTAP21-1Q3LI58 79 aa3.58□□□□□ -1.84
SRRT-218ENST00000620394 PRM1P04553 51 aa3.29□□□□□ -1.88
SRRT-218ENST00000620394 H3BS24 57 aa3.27□□□□□ -1.89
SRRT-218ENST00000620394 NDUFAF8A1L188 74 aa3□□□□□ -1.93
SRRT-218ENST00000620394 MUC16Q8WXI7 14507 aa2.81□□□□□ -1.96
SRRT-218ENST00000620394 INE1O15225 51 aa2.37□□□□□ -2.03
SRRT-218ENST00000620394 A0A0A0MQY5 61 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms