RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
SRSF3-207ENST00000620389 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
SRSF3-207ENST00000620389 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
SRSF3-207ENST00000620389 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
SRSF3-207ENST00000620389 MT1BP07438 61 aa2.98□□□□□ -1.93
SRSF3-207ENST00000620389 M0R2T5 61 aa2.97□□□□□ -1.93
SRSF3-207ENST00000620389 MT1FP04733 61 aa2.97□□□□□ -1.93
SRSF3-207ENST00000620389 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
SRSF3-207ENST00000620389 MT2AP02795 61 aa2.94□□□□□ -1.94
SRSF3-207ENST00000620389 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
SRSF3-207ENST00000620389 KRTAP9-8Q9BYQ0 159 aa2.87□□□□□ -1.95
SRSF3-207ENST00000620389 MT1HP80294 61 aa2.85□□□□□ -1.95
SRSF3-207ENST00000620389 KMT2DO14686 5537 aa2.84□□□□□ -1.96
SRSF3-207ENST00000620389 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
SRSF3-207ENST00000620389 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
SRSF3-207ENST00000620389 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
SRSF3-207ENST00000620389 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
SRSF3-207ENST00000620389 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
SRSF3-207ENST00000620389 MT1LQ93083 61 aa2.69□□□□□ -1.98
SRSF3-207ENST00000620389 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
SRSF3-207ENST00000620389 PRM1P04553 51 aa2.64□□□□□ -1.99
SRSF3-207ENST00000620389 USH2AO75445 5202 aa2.63□□□□□ -1.99
SRSF3-207ENST00000620389 MT1EP04732 61 aa2.62□□□□□ -1.99
SRSF3-207ENST00000620389 MT1GP13640 62 aa2.58□□□□□ -2
SRSF3-207ENST00000620389 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
SRSF3-207ENST00000620389 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
SRSF3-207ENST00000620389 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
SRSF3-207ENST00000620389 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
SRSF3-207ENST00000620389 MT1AP04731 61 aa2.51□□□□□ -2.01
SRSF3-207ENST00000620389 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
SRSF3-207ENST00000620389 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SRSF3-207ENST00000620389 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
SRSF3-207ENST00000620389 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
SRSF3-207ENST00000620389 MT3P25713 68 aa2.44□□□□□ -2.02
SRSF3-207ENST00000620389 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
SRSF3-207ENST00000620389 MT1MQ8N339 61 aa2.41□□□□□ -2.02
SRSF3-207ENST00000620389 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
SRSF3-207ENST00000620389 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
SRSF3-207ENST00000620389 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
SRSF3-207ENST00000620389 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
SRSF3-207ENST00000620389 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
SRSF3-207ENST00000620389 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
SRSF3-207ENST00000620389 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
SRSF3-207ENST00000620389 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
SRSF3-207ENST00000620389 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
SRSF3-207ENST00000620389 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
SRSF3-207ENST00000620389 NEBP20929 6669 aa2.29□□□□□ -2.04
SRSF3-207ENST00000620389 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
SRSF3-207ENST00000620389 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
SRSF3-207ENST00000620389 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SRSF3-207ENST00000620389 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
SRSF3-207ENST00000620389 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
SRSF3-207ENST00000620389 SPRR2EP22531 72 aa2.14□□□□□ -2.07
SRSF3-207ENST00000620389 SPRR2BP35325 72 aa2.14□□□□□ -2.07
SRSF3-207ENST00000620389 SPRR2AP35326 72 aa2.14□□□□□ -2.07
SRSF3-207ENST00000620389 SPRR2DP22532 72 aa2.09□□□□□ -2.07
SRSF3-207ENST00000620389 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
SRSF3-207ENST00000620389 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
SRSF3-207ENST00000620389 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
SRSF3-207ENST00000620389 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SRSF3-207ENST00000620389 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
SRSF3-207ENST00000620389 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
SRSF3-207ENST00000620389 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
SRSF3-207ENST00000620389 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
SRSF3-207ENST00000620389 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SRSF3-207ENST00000620389 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
SRSF3-207ENST00000620389 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
SRSF3-207ENST00000620389 MT4P47944 62 aa1.74□□□□□ -2.13
SRSF3-207ENST00000620389 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
SRSF3-207ENST00000620389 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SRSF3-207ENST00000620389 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
SRSF3-207ENST00000620389 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
SRSF3-207ENST00000620389 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
SRSF3-207ENST00000620389 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
SRSF3-207ENST00000620389 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
SRSF3-207ENST00000620389 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SRSF3-207ENST00000620389 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
SRSF3-207ENST00000620389 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms