RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 LCE1FQ5T754 118 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 LCE1AQ5T7P2 110 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 MYCBP2O75592 4640 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 HSPG2P98160 4391 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP4-8A0A0G2JLE6 195 aa1.53□□□□□ -2.16
CHL1-216ENST00000620033 KRTAP4-8Q9BYQ9 185 aa1.53□□□□□ -2.16
CHL1-216ENST00000620033 LYSTQ99698 3801 aa1.53□□□□□ -2.16
CHL1-216ENST00000620033 HERC2O95714 4834 aa1.53□□□□□ -2.16
CHL1-216ENST00000620033 CSMD3Q7Z407 3707 aa1.52□□□□□ -2.17
CHL1-216ENST00000620033 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
CHL1-216ENST00000620033 LCE4AQ5TA78 99 aa1.52□□□□□ -2.17
CHL1-216ENST00000620033 APOBP04114 4563 aaKnown RBP1.52□□□□□ -2.17
CHL1-216ENST00000620033 MT1XP80297 61 aa1.52□□□□□ -2.17
CHL1-216ENST00000620033 MT3P25713 68 aa1.51□□□□□ -2.17
CHL1-216ENST00000620033 KMT2DO14686 5537 aa1.51□□□□□ -2.17
CHL1-216ENST00000620033 KRTAP9-9Q9BYP9 154 aa1.51□□□□□ -2.17
CHL1-216ENST00000620033 KRTAP4-7Q9BYR0 210 aa1.51□□□□□ -2.17
CHL1-216ENST00000620033 MT1BP07438 61 aa1.49□□□□□ -2.17
CHL1-216ENST00000620033 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
CHL1-216ENST00000620033 TNXBP22105 4242 aa1.48□□□□□ -2.17
CHL1-216ENST00000620033 LRP1Q07954 4544 aaKnown RBP1.47□□□□□ -2.17
CHL1-216ENST00000620033 PKD1P98161 4303 aa1.45□□□□□ -2.18
CHL1-216ENST00000620033 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
CHL1-216ENST00000620033 KRTAP19-2Q3LHN2 52 aa1.44□□□□□ -2.18
CHL1-216ENST00000620033 KRTAP4-12Q9BQ66 201 aa1.44□□□□□ -2.18
CHL1-216ENST00000620033 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
CHL1-216ENST00000620033 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
CHL1-216ENST00000620033 KRTAP4-2Q9BYR5 136 aa1.42□□□□□ -2.18
CHL1-216ENST00000620033 MT1MQ8N339 61 aa1.42□□□□□ -2.18
CHL1-216ENST00000620033 MT1EP04732 61 aa1.42□□□□□ -2.18
CHL1-216ENST00000620033 KRTAP9-4Q9BYQ2 154 aa1.41□□□□□ -2.18
CHL1-216ENST00000620033 MT1LQ93083 61 aa1.4□□□□□ -2.19
CHL1-216ENST00000620033 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CHL1-216ENST00000620033 LPAP08519 4548 aa1.38□□□□□ -2.19
CHL1-216ENST00000620033 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
CHL1-216ENST00000620033 FLGP20930 4061 aaPredicted RBP1.36□□□□□ -2.19
CHL1-216ENST00000620033 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
CHL1-216ENST00000620033 LRP2P98164 4655 aa1.35□□□□□ -2.19
CHL1-216ENST00000620033 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
CHL1-216ENST00000620033 MUC2Q02817 5179 aa1.34□□□□□ -2.2
CHL1-216ENST00000620033 KRTAP5-3Q6L8H2 238 aa1.33□□□□□ -2.2
CHL1-216ENST00000620033 KRTAP4-3Q9BYR4 195 aa1.33□□□□□ -2.2
CHL1-216ENST00000620033 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
CHL1-216ENST00000620033 MT1AP04731 61 aa1.3□□□□□ -2.2
CHL1-216ENST00000620033 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
CHL1-216ENST00000620033 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
CHL1-216ENST00000620033 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
CHL1-216ENST00000620033 PRM1P04553 51 aa1.25□□□□□ -2.21
CHL1-216ENST00000620033 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
CHL1-216ENST00000620033 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
CHL1-216ENST00000620033 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
CHL1-216ENST00000620033 OBSCNQ5VST9 7968 aa1.2□□□□□ -2.22
CHL1-216ENST00000620033 NEBP20929 6669 aa1.19□□□□□ -2.22
CHL1-216ENST00000620033 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
CHL1-216ENST00000620033 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
CHL1-216ENST00000620033 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CHL1-216ENST00000620033 KRTAP4-11Q9BYQ6 195 aa1.12□□□□□ -2.23
CHL1-216ENST00000620033 KRTAP5-4Q6L8H1 288 aa1.12□□□□□ -2.23
CHL1-216ENST00000620033 KRTAP5-9P26371 169 aa1.11□□□□□ -2.23
CHL1-216ENST00000620033 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
CHL1-216ENST00000620033 KRTAP9-6A8MVA2 160 aa1.09□□□□□ -2.24
CHL1-216ENST00000620033 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
CHL1-216ENST00000620033 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
CHL1-216ENST00000620033 KRTAP4-4Q9BYR3 166 aa1.04□□□□□ -2.24
CHL1-216ENST00000620033 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
CHL1-216ENST00000620033 KRTAP5-5Q701N2 237 aaPredicted RBP0.98□□□□□ -2.25
CHL1-216ENST00000620033 KRTAP5-11Q6L8G4 156 aa0.91□□□□□ -2.26
CHL1-216ENST00000620033 KRTAP5-8O75690 187 aa0.89□□□□□ -2.27
CHL1-216ENST00000620033 KRTAP5-7Q6L8G8 165 aa0.79□□□□□ -2.28
CHL1-216ENST00000620033 KRTAP5-1Q6L8H4 278 aa0.77□□□□□ -2.29
CHL1-216ENST00000620033 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
CHL1-216ENST00000620033 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CHL1-216ENST00000620033 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
CHL1-216ENST00000620033 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms