RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
TMCO3-210ENST00000620021 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
TMCO3-210ENST00000620021 MT1LQ93083 61 aa4.59□□□□□ -1.67
TMCO3-210ENST00000620021 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
TMCO3-210ENST00000620021 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
TMCO3-210ENST00000620021 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
TMCO3-210ENST00000620021 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
TMCO3-210ENST00000620021 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
TMCO3-210ENST00000620021 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
TMCO3-210ENST00000620021 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
TMCO3-210ENST00000620021 MT1MQ8N339 61 aa4.36□□□□□ -1.71
TMCO3-210ENST00000620021 MT1GP13640 62 aa4.35□□□□□ -1.71
TMCO3-210ENST00000620021 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
TMCO3-210ENST00000620021 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
TMCO3-210ENST00000620021 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
TMCO3-210ENST00000620021 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
TMCO3-210ENST00000620021 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
TMCO3-210ENST00000620021 SPRR2EP22531 72 aa4.16□□□□□ -1.74
TMCO3-210ENST00000620021 SPRR2BP35325 72 aa4.16□□□□□ -1.74
TMCO3-210ENST00000620021 SPRR2AP35326 72 aa4.16□□□□□ -1.74
TMCO3-210ENST00000620021 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
TMCO3-210ENST00000620021 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
TMCO3-210ENST00000620021 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
TMCO3-210ENST00000620021 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
TMCO3-210ENST00000620021 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
TMCO3-210ENST00000620021 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
TMCO3-210ENST00000620021 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
TMCO3-210ENST00000620021 SPRR2DP22532 72 aa3.98□□□□□ -1.77
TMCO3-210ENST00000620021 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
TMCO3-210ENST00000620021 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
TMCO3-210ENST00000620021 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
TMCO3-210ENST00000620021 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
TMCO3-210ENST00000620021 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
TMCO3-210ENST00000620021 NEBP20929 6669 aa3.88□□□□□ -1.79
TMCO3-210ENST00000620021 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
TMCO3-210ENST00000620021 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
TMCO3-210ENST00000620021 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
TMCO3-210ENST00000620021 MT1AP04731 61 aa3.82□□□□□ -1.8
TMCO3-210ENST00000620021 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
TMCO3-210ENST00000620021 PRM1P04553 51 aa3.68□□□□□ -1.82
TMCO3-210ENST00000620021 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
TMCO3-210ENST00000620021 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
TMCO3-210ENST00000620021 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
TMCO3-210ENST00000620021 MT4P47944 62 aa3.58□□□□□ -1.84
TMCO3-210ENST00000620021 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
TMCO3-210ENST00000620021 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
TMCO3-210ENST00000620021 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
TMCO3-210ENST00000620021 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
TMCO3-210ENST00000620021 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
TMCO3-210ENST00000620021 MT3P25713 68 aa3.46□□□□□ -1.86
TMCO3-210ENST00000620021 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
TMCO3-210ENST00000620021 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
TMCO3-210ENST00000620021 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
TMCO3-210ENST00000620021 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
TMCO3-210ENST00000620021 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
TMCO3-210ENST00000620021 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
TMCO3-210ENST00000620021 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
TMCO3-210ENST00000620021 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
TMCO3-210ENST00000620021 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
TMCO3-210ENST00000620021 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
TMCO3-210ENST00000620021 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
TMCO3-210ENST00000620021 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
TMCO3-210ENST00000620021 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
TMCO3-210ENST00000620021 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
TMCO3-210ENST00000620021 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
TMCO3-210ENST00000620021 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
TMCO3-210ENST00000620021 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
TMCO3-210ENST00000620021 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
TMCO3-210ENST00000620021 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
TMCO3-210ENST00000620021 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
TMCO3-210ENST00000620021 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
TMCO3-210ENST00000620021 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
TMCO3-210ENST00000620021 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
TMCO3-210ENST00000620021 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
TMCO3-210ENST00000620021 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
TMCO3-210ENST00000620021 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
TMCO3-210ENST00000620021 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
TMCO3-210ENST00000620021 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 113 ms