RNA–Protein interactions for RNA: ENST00000619881.4

CARHSP1-220, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CARHSP1, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-220ENST00000619881 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
CARHSP1-220ENST00000619881 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
CARHSP1-220ENST00000619881 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
CARHSP1-220ENST00000619881 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.69
CARHSP1-220ENST00000619881 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
CARHSP1-220ENST00000619881 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
CARHSP1-220ENST00000619881 MT1LQ93083 61 aa4.41□□□□□ -1.7
CARHSP1-220ENST00000619881 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
CARHSP1-220ENST00000619881 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
CARHSP1-220ENST00000619881 PRM1P04553 51 aa4.36□□□□□ -1.71
CARHSP1-220ENST00000619881 MT1EP04732 61 aa4.36□□□□□ -1.71
CARHSP1-220ENST00000619881 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
CARHSP1-220ENST00000619881 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
CARHSP1-220ENST00000619881 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
CARHSP1-220ENST00000619881 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
CARHSP1-220ENST00000619881 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
CARHSP1-220ENST00000619881 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
CARHSP1-220ENST00000619881 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
CARHSP1-220ENST00000619881 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
CARHSP1-220ENST00000619881 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
CARHSP1-220ENST00000619881 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
CARHSP1-220ENST00000619881 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
CARHSP1-220ENST00000619881 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
CARHSP1-220ENST00000619881 MT1AP04731 61 aa4.13□□□□□ -1.75
CARHSP1-220ENST00000619881 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
CARHSP1-220ENST00000619881 MT1GP13640 62 aa4.13□□□□□ -1.75
CARHSP1-220ENST00000619881 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
CARHSP1-220ENST00000619881 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
CARHSP1-220ENST00000619881 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
CARHSP1-220ENST00000619881 MT1MQ8N339 61 aa4.05□□□□□ -1.76
CARHSP1-220ENST00000619881 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
CARHSP1-220ENST00000619881 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
CARHSP1-220ENST00000619881 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
CARHSP1-220ENST00000619881 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
CARHSP1-220ENST00000619881 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CARHSP1-220ENST00000619881 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
CARHSP1-220ENST00000619881 SPRR2EP22531 72 aa3.88□□□□□ -1.79
CARHSP1-220ENST00000619881 SPRR2BP35325 72 aa3.88□□□□□ -1.79
CARHSP1-220ENST00000619881 SPRR2AP35326 72 aa3.88□□□□□ -1.79
CARHSP1-220ENST00000619881 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
CARHSP1-220ENST00000619881 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
CARHSP1-220ENST00000619881 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
CARHSP1-220ENST00000619881 SPRR2DP22532 72 aa3.71□□□□□ -1.82
CARHSP1-220ENST00000619881 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
CARHSP1-220ENST00000619881 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
CARHSP1-220ENST00000619881 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
CARHSP1-220ENST00000619881 NEBP20929 6669 aa3.63□□□□□ -1.83
CARHSP1-220ENST00000619881 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
CARHSP1-220ENST00000619881 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
CARHSP1-220ENST00000619881 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
CARHSP1-220ENST00000619881 MT4P47944 62 aa3.34□□□□□ -1.87
CARHSP1-220ENST00000619881 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
CARHSP1-220ENST00000619881 MT3P25713 68 aa3.29□□□□□ -1.88
CARHSP1-220ENST00000619881 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
CARHSP1-220ENST00000619881 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
CARHSP1-220ENST00000619881 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CARHSP1-220ENST00000619881 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CARHSP1-220ENST00000619881 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
CARHSP1-220ENST00000619881 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CARHSP1-220ENST00000619881 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
CARHSP1-220ENST00000619881 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
CARHSP1-220ENST00000619881 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
CARHSP1-220ENST00000619881 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
CARHSP1-220ENST00000619881 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
CARHSP1-220ENST00000619881 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
CARHSP1-220ENST00000619881 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
CARHSP1-220ENST00000619881 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
CARHSP1-220ENST00000619881 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
CARHSP1-220ENST00000619881 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CARHSP1-220ENST00000619881 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
CARHSP1-220ENST00000619881 KRTAP5-8O75690 187 aa2.58□□□□□ -2
CARHSP1-220ENST00000619881 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CARHSP1-220ENST00000619881 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
CARHSP1-220ENST00000619881 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
CARHSP1-220ENST00000619881 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CARHSP1-220ENST00000619881 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CARHSP1-220ENST00000619881 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 64.2 ms