RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.28
MMP28-207ENST00000619655 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
MMP28-207ENST00000619655 SYNE2Q8WXH0 6885 aaKnown RBP6.98□□□□□ -1.29
MMP28-207ENST00000619655 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
MMP28-207ENST00000619655 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
MMP28-207ENST00000619655 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
MMP28-207ENST00000619655 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
MMP28-207ENST00000619655 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
MMP28-207ENST00000619655 MT1GP13640 62 aa6.79□□□□□ -1.32
MMP28-207ENST00000619655 MT1MQ8N339 61 aa6.78□□□□□ -1.32
MMP28-207ENST00000619655 MDN1Q9NU22 5596 aa6.73□□□□□ -1.33
MMP28-207ENST00000619655 LCE5AQ5TCM9 118 aa6.7□□□□□ -1.34
MMP28-207ENST00000619655 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
MMP28-207ENST00000619655 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.35
MMP28-207ENST00000619655 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
MMP28-207ENST00000619655 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
MMP28-207ENST00000619655 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
MMP28-207ENST00000619655 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
MMP28-207ENST00000619655 SPRR2EP22531 72 aa6.49□□□□□ -1.37
MMP28-207ENST00000619655 SPRR2BP35325 72 aa6.49□□□□□ -1.37
MMP28-207ENST00000619655 SPRR2AP35326 72 aa6.49□□□□□ -1.37
MMP28-207ENST00000619655 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
MMP28-207ENST00000619655 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
MMP28-207ENST00000619655 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
MMP28-207ENST00000619655 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
MMP28-207ENST00000619655 SPRR2DP22532 72 aa6.24□□□□□ -1.41
MMP28-207ENST00000619655 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
MMP28-207ENST00000619655 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
MMP28-207ENST00000619655 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
MMP28-207ENST00000619655 LCE3BQ5TA77 95 aa6□□□□□ -1.45
MMP28-207ENST00000619655 NEBP20929 6669 aa6□□□□□ -1.45
MMP28-207ENST00000619655 MT1AP04731 61 aa5.99□□□□□ -1.45
MMP28-207ENST00000619655 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
MMP28-207ENST00000619655 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
MMP28-207ENST00000619655 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
MMP28-207ENST00000619655 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
MMP28-207ENST00000619655 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
MMP28-207ENST00000619655 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
MMP28-207ENST00000619655 MT4P47944 62 aa5.5□□□□□ -1.53
MMP28-207ENST00000619655 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
MMP28-207ENST00000619655 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
MMP28-207ENST00000619655 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
MMP28-207ENST00000619655 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
MMP28-207ENST00000619655 MT3P25713 68 aa5.42□□□□□ -1.54
MMP28-207ENST00000619655 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
MMP28-207ENST00000619655 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
MMP28-207ENST00000619655 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
MMP28-207ENST00000619655 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
MMP28-207ENST00000619655 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
MMP28-207ENST00000619655 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
MMP28-207ENST00000619655 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
MMP28-207ENST00000619655 PRM1P04553 51 aa5.03□□□□□ -1.6
MMP28-207ENST00000619655 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
MMP28-207ENST00000619655 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
MMP28-207ENST00000619655 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
MMP28-207ENST00000619655 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
MMP28-207ENST00000619655 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
MMP28-207ENST00000619655 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
MMP28-207ENST00000619655 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
MMP28-207ENST00000619655 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
MMP28-207ENST00000619655 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
MMP28-207ENST00000619655 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
MMP28-207ENST00000619655 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
MMP28-207ENST00000619655 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
MMP28-207ENST00000619655 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
MMP28-207ENST00000619655 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
MMP28-207ENST00000619655 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.78
MMP28-207ENST00000619655 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
MMP28-207ENST00000619655 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
MMP28-207ENST00000619655 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
MMP28-207ENST00000619655 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
MMP28-207ENST00000619655 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
MMP28-207ENST00000619655 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
MMP28-207ENST00000619655 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
MMP28-207ENST00000619655 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
MMP28-207ENST00000619655 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
MMP28-207ENST00000619655 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
MMP28-207ENST00000619655 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 75.3 ms