RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
SEMA3B-214ENST00000619119 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
SEMA3B-214ENST00000619119 MT1EP04732 61 aa5.37□□□□□ -1.55
SEMA3B-214ENST00000619119 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
SEMA3B-214ENST00000619119 MT1LQ93083 61 aa5.3□□□□□ -1.56
SEMA3B-214ENST00000619119 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
SEMA3B-214ENST00000619119 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
SEMA3B-214ENST00000619119 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
SEMA3B-214ENST00000619119 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
SEMA3B-214ENST00000619119 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
SEMA3B-214ENST00000619119 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
SEMA3B-214ENST00000619119 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
SEMA3B-214ENST00000619119 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
SEMA3B-214ENST00000619119 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
SEMA3B-214ENST00000619119 MT1MQ8N339 61 aa5.04□□□□□ -1.6
SEMA3B-214ENST00000619119 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
SEMA3B-214ENST00000619119 MT1GP13640 62 aa5.03□□□□□ -1.6
SEMA3B-214ENST00000619119 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
SEMA3B-214ENST00000619119 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
SEMA3B-214ENST00000619119 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
SEMA3B-214ENST00000619119 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
SEMA3B-214ENST00000619119 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
SEMA3B-214ENST00000619119 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
SEMA3B-214ENST00000619119 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
SEMA3B-214ENST00000619119 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
SEMA3B-214ENST00000619119 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
SEMA3B-214ENST00000619119 SPRR2EP22531 72 aa4.81□□□□□ -1.64
SEMA3B-214ENST00000619119 SPRR2BP35325 72 aa4.81□□□□□ -1.64
SEMA3B-214ENST00000619119 SPRR2AP35326 72 aa4.81□□□□□ -1.64
SEMA3B-214ENST00000619119 PRM1P04553 51 aa4.79□□□□□ -1.64
SEMA3B-214ENST00000619119 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
SEMA3B-214ENST00000619119 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
SEMA3B-214ENST00000619119 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
SEMA3B-214ENST00000619119 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
SEMA3B-214ENST00000619119 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
SEMA3B-214ENST00000619119 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
SEMA3B-214ENST00000619119 SPRR2DP22532 72 aa4.6□□□□□ -1.67
SEMA3B-214ENST00000619119 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
SEMA3B-214ENST00000619119 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
SEMA3B-214ENST00000619119 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
SEMA3B-214ENST00000619119 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
SEMA3B-214ENST00000619119 MT1AP04731 61 aa4.45□□□□□ -1.7
SEMA3B-214ENST00000619119 NEBP20929 6669 aa4.45□□□□□ -1.7
SEMA3B-214ENST00000619119 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
SEMA3B-214ENST00000619119 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
SEMA3B-214ENST00000619119 MT4P47944 62 aa4.12□□□□□ -1.75
SEMA3B-214ENST00000619119 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SEMA3B-214ENST00000619119 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
SEMA3B-214ENST00000619119 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
SEMA3B-214ENST00000619119 MT3P25713 68 aa4.03□□□□□ -1.76
SEMA3B-214ENST00000619119 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
SEMA3B-214ENST00000619119 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
SEMA3B-214ENST00000619119 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
SEMA3B-214ENST00000619119 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
SEMA3B-214ENST00000619119 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
SEMA3B-214ENST00000619119 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
SEMA3B-214ENST00000619119 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
SEMA3B-214ENST00000619119 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
SEMA3B-214ENST00000619119 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
SEMA3B-214ENST00000619119 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SEMA3B-214ENST00000619119 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
SEMA3B-214ENST00000619119 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
SEMA3B-214ENST00000619119 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
SEMA3B-214ENST00000619119 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
SEMA3B-214ENST00000619119 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
SEMA3B-214ENST00000619119 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
SEMA3B-214ENST00000619119 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
SEMA3B-214ENST00000619119 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
SEMA3B-214ENST00000619119 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SEMA3B-214ENST00000619119 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
SEMA3B-214ENST00000619119 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
SEMA3B-214ENST00000619119 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.94
SEMA3B-214ENST00000619119 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
SEMA3B-214ENST00000619119 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SEMA3B-214ENST00000619119 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
SEMA3B-214ENST00000619119 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SEMA3B-214ENST00000619119 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SEMA3B-214ENST00000619119 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms