RNA–Protein interactions for RNA: ENST00000619009.4

BARD1-213, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-213ENST00000619009 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
BARD1-213ENST00000619009 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
BARD1-213ENST00000619009 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
BARD1-213ENST00000619009 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
BARD1-213ENST00000619009 KRTAP2-3P0C7H8 128 aa3.36□□□□□ -1.87
BARD1-213ENST00000619009 KRTAP2-4Q9BYR9 128 aa3.36□□□□□ -1.87
BARD1-213ENST00000619009 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
BARD1-213ENST00000619009 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
BARD1-213ENST00000619009 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
BARD1-213ENST00000619009 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
BARD1-213ENST00000619009 MT1EP04732 61 aa3.23□□□□□ -1.89
BARD1-213ENST00000619009 MT1GP13640 62 aa3.21□□□□□ -1.89
BARD1-213ENST00000619009 SPRR2EP22531 72 aa3.21□□□□□ -1.9
BARD1-213ENST00000619009 SPRR2BP35325 72 aa3.21□□□□□ -1.9
BARD1-213ENST00000619009 SPRR2AP35326 72 aa3.21□□□□□ -1.9
BARD1-213ENST00000619009 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
BARD1-213ENST00000619009 MT1LQ93083 61 aa3.2□□□□□ -1.9
BARD1-213ENST00000619009 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
BARD1-213ENST00000619009 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
BARD1-213ENST00000619009 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
BARD1-213ENST00000619009 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
BARD1-213ENST00000619009 MT1MQ8N339 61 aa3.08□□□□□ -1.92
BARD1-213ENST00000619009 SPRR2DP22532 72 aa3.07□□□□□ -1.92
BARD1-213ENST00000619009 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
BARD1-213ENST00000619009 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
BARD1-213ENST00000619009 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
BARD1-213ENST00000619009 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
BARD1-213ENST00000619009 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
BARD1-213ENST00000619009 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
BARD1-213ENST00000619009 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
BARD1-213ENST00000619009 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
BARD1-213ENST00000619009 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
BARD1-213ENST00000619009 MT4P47944 62 aa2.85□□□□□ -1.95
BARD1-213ENST00000619009 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
BARD1-213ENST00000619009 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
BARD1-213ENST00000619009 PRM1P04553 51 aa2.82□□□□□ -1.96
BARD1-213ENST00000619009 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
BARD1-213ENST00000619009 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
BARD1-213ENST00000619009 NEBP20929 6669 aa2.74□□□□□ -1.97
BARD1-213ENST00000619009 MT1AP04731 61 aa2.71□□□□□ -1.98
BARD1-213ENST00000619009 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
BARD1-213ENST00000619009 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
BARD1-213ENST00000619009 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
BARD1-213ENST00000619009 MT3P25713 68 aa2.55□□□□□ -2
BARD1-213ENST00000619009 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2
BARD1-213ENST00000619009 LCE1DQ5T752 114 aa2.51□□□□□ -2.01
BARD1-213ENST00000619009 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
BARD1-213ENST00000619009 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
BARD1-213ENST00000619009 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
BARD1-213ENST00000619009 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
BARD1-213ENST00000619009 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
BARD1-213ENST00000619009 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
BARD1-213ENST00000619009 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
BARD1-213ENST00000619009 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
BARD1-213ENST00000619009 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
BARD1-213ENST00000619009 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
BARD1-213ENST00000619009 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
BARD1-213ENST00000619009 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
BARD1-213ENST00000619009 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
BARD1-213ENST00000619009 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
BARD1-213ENST00000619009 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
BARD1-213ENST00000619009 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
BARD1-213ENST00000619009 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
BARD1-213ENST00000619009 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
BARD1-213ENST00000619009 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
BARD1-213ENST00000619009 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
BARD1-213ENST00000619009 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
BARD1-213ENST00000619009 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
BARD1-213ENST00000619009 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
BARD1-213ENST00000619009 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
BARD1-213ENST00000619009 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
BARD1-213ENST00000619009 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
BARD1-213ENST00000619009 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
BARD1-213ENST00000619009 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
BARD1-213ENST00000619009 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
BARD1-213ENST00000619009 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
BARD1-213ENST00000619009 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 73.3 ms