RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 OBSCNQ5VST9 7968 aa1.15□□□□□ -2.22
LPP-221ENST00000618621 KRTAP2-2Q9BYT5 123 aa1.15□□□□□ -2.22
LPP-221ENST00000618621 KRTAP9-4Q9BYQ2 154 aa1.15□□□□□ -2.22
LPP-221ENST00000618621 KRTAP19-1Q8IUB9 90 aa1.15□□□□□ -2.22
LPP-221ENST00000618621 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
LPP-221ENST00000618621 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
LPP-221ENST00000618621 KRTAP9-8Q9BYQ0 159 aa1.12□□□□□ -2.23
LPP-221ENST00000618621 LCE3DQ9BYE3 92 aa1.11□□□□□ -2.23
LPP-221ENST00000618621 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
LPP-221ENST00000618621 MT1XP80297 61 aa1.11□□□□□ -2.23
LPP-221ENST00000618621 LCE3EQ5T5B0 92 aa1.11□□□□□ -2.23
LPP-221ENST00000618621 KRTAP12-4P60329 112 aa1.1□□□□□ -2.23
LPP-221ENST00000618621 SPRR2DP22532 72 aa1.09□□□□□ -2.23
LPP-221ENST00000618621 MT1BP07438 61 aa1.08□□□□□ -2.24
LPP-221ENST00000618621 KRTAP9-3Q9BYQ3 159 aa1.08□□□□□ -2.24
LPP-221ENST00000618621 LCE1AQ5T7P2 110 aa1.08□□□□□ -2.24
LPP-221ENST00000618621 SPRR2EP22531 72 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 SPRR2BP35325 72 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 SPRR2AP35326 72 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 KRTAP4-8A0A0G2JLE6 195 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 KRTAP4-8Q9BYQ9 185 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 SYNE1Q8NF91 8797 aaKnown RBP1.07□□□□□ -2.24
LPP-221ENST00000618621 LCE1EQ5T753 118 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 LCE4AQ5TA78 99 aa1.07□□□□□ -2.24
LPP-221ENST00000618621 KRTAP9-6A0A140TA67 174 aa1.04□□□□□ -2.24
LPP-221ENST00000618621 KRTAP9-7A8MTY7 169 aa1.04□□□□□ -2.24
LPP-221ENST00000618621 MT1GP13640 62 aa1.04□□□□□ -2.24
LPP-221ENST00000618621 LCE1DQ5T752 114 aa1.04□□□□□ -2.24
LPP-221ENST00000618621 KRTAP6-3Q3LI67 103 aa1.04□□□□□ -2.24
LPP-221ENST00000618621 MT1LQ93083 61 aa1.02□□□□□ -2.25
LPP-221ENST00000618621 KRTAP4-7Q9BYR0 210 aa1.02□□□□□ -2.25
LPP-221ENST00000618621 MT1EP04732 61 aa1.01□□□□□ -2.25
LPP-221ENST00000618621 KRTAP2-3P0C7H8 128 aa1.01□□□□□ -2.25
LPP-221ENST00000618621 KRTAP2-4Q9BYR9 128 aa1.01□□□□□ -2.25
LPP-221ENST00000618621 KRTAP2-1Q9BYU5 128 aa1.01□□□□□ -2.25
LPP-221ENST00000618621 KRTAP9-9Q9BYP9 154 aa1.01□□□□□ -2.25
LPP-221ENST00000618621 KRTAP9-2Q9BYQ4 174 aa1□□□□□ -2.25
LPP-221ENST00000618621 KRTAP4-3Q9BYR4 195 aa0.99□□□□□ -2.25
LPP-221ENST00000618621 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
LPP-221ENST00000618621 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
LPP-221ENST00000618621 KRTAP9-6A8MVA2 160 aa0.96□□□□□ -2.26
LPP-221ENST00000618621 LOC100996750A0A140TA64 210 aa0.95□□□□□ -2.26
LPP-221ENST00000618621 MT1MQ8N339 61 aa0.95□□□□□ -2.26
LPP-221ENST00000618621 KRTAP19-7Q3SYF9 63 aa0.94□□□□□ -2.26
LPP-221ENST00000618621 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
LPP-221ENST00000618621 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
LPP-221ENST00000618621 MT1AP04731 61 aa0.93□□□□□ -2.26
LPP-221ENST00000618621 MT4P47944 62 aa0.91□□□□□ -2.26
LPP-221ENST00000618621 PRM1P04553 51 aa0.91□□□□□ -2.26
LPP-221ENST00000618621 KRTAP4-9Q9BYQ8 210 aa0.9□□□□□ -2.27
LPP-221ENST00000618621 KRTAP20-1Q3LI63 56 aa0.89□□□□□ -2.27
LPP-221ENST00000618621 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.87□□□□□ -2.27
LPP-221ENST00000618621 KRTAP4-6Q9BYQ5 205 aa0.83□□□□□ -2.28
LPP-221ENST00000618621 KRTAP6-1Q3LI64 71 aa0.82□□□□□ -2.28
LPP-221ENST00000618621 MUC19Q7Z5P9 8384 aa0.82□□□□□ -2.28
LPP-221ENST00000618621 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
LPP-221ENST00000618621 KRTAP5-5Q701N2 237 aaPredicted RBP0.76□□□□□ -2.29
LPP-221ENST00000618621 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
LPP-221ENST00000618621 KRTAP5-9P26371 169 aa0.75□□□□□ -2.29
LPP-221ENST00000618621 KRTAP4-12Q9BQ66 201 aa0.74□□□□□ -2.29
LPP-221ENST00000618621 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
LPP-221ENST00000618621 KRTAP4-11Q9BYQ6 195 aa0.72□□□□□ -2.29
LPP-221ENST00000618621 KRTAP4-2Q9BYR5 136 aa0.71□□□□□ -2.3
LPP-221ENST00000618621 KRTAP4-4Q9BYR3 166 aa0.65□□□□□ -2.31
LPP-221ENST00000618621 KRTAP5-3Q6L8H2 238 aa0.63□□□□□ -2.31
LPP-221ENST00000618621 KRTAP5-4Q6L8H1 288 aa0.63□□□□□ -2.31
LPP-221ENST00000618621 KRTAP5-2Q701N4 177 aa0.6□□□□□ -2.31
LPP-221ENST00000618621 KRTAP5-8O75690 187 aa0.56□□□□□ -2.32
LPP-221ENST00000618621 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
LPP-221ENST00000618621 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
LPP-221ENST00000618621 KRTAP5-10Q6L8G5 202 aa0.52□□□□□ -2.33
LPP-221ENST00000618621 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.49□□□□□ -2.33
LPP-221ENST00000618621 KRTAP5-1Q6L8H4 278 aa0.49□□□□□ -2.33
LPP-221ENST00000618621 KRTAP21-2Q3LI59 83 aa0.47□□□□□ -2.33
LPP-221ENST00000618621 KRTAP5-11Q6L8G4 156 aa0.46□□□□□ -2.34
LPP-221ENST00000618621 KRTAP5-7Q6L8G8 165 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms