RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
CBX5-206ENST00000618078 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
CBX5-206ENST00000618078 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
CBX5-206ENST00000618078 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
CBX5-206ENST00000618078 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
CBX5-206ENST00000618078 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
CBX5-206ENST00000618078 MT1MQ8N339 61 aa5.09□□□□□ -1.59
CBX5-206ENST00000618078 MT1GP13640 62 aa5.07□□□□□ -1.6
CBX5-206ENST00000618078 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CBX5-206ENST00000618078 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
CBX5-206ENST00000618078 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
CBX5-206ENST00000618078 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
CBX5-206ENST00000618078 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
CBX5-206ENST00000618078 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
CBX5-206ENST00000618078 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
CBX5-206ENST00000618078 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
CBX5-206ENST00000618078 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
CBX5-206ENST00000618078 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
CBX5-206ENST00000618078 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
CBX5-206ENST00000618078 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
CBX5-206ENST00000618078 SPRR2EP22531 72 aa4.79□□□□□ -1.64
CBX5-206ENST00000618078 SPRR2BP35325 72 aa4.79□□□□□ -1.64
CBX5-206ENST00000618078 SPRR2AP35326 72 aa4.79□□□□□ -1.64
CBX5-206ENST00000618078 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
CBX5-206ENST00000618078 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
CBX5-206ENST00000618078 INE1O15225 51 aa4.62□□□□□ -1.67
CBX5-206ENST00000618078 SPRR2DP22532 72 aa4.59□□□□□ -1.67
CBX5-206ENST00000618078 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
CBX5-206ENST00000618078 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
CBX5-206ENST00000618078 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
CBX5-206ENST00000618078 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
CBX5-206ENST00000618078 MT1AP04731 61 aa4.51□□□□□ -1.69
CBX5-206ENST00000618078 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CBX5-206ENST00000618078 NEBP20929 6669 aa4.43□□□□□ -1.7
CBX5-206ENST00000618078 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
CBX5-206ENST00000618078 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
CBX5-206ENST00000618078 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
CBX5-206ENST00000618078 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
CBX5-206ENST00000618078 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
CBX5-206ENST00000618078 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CBX5-206ENST00000618078 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
CBX5-206ENST00000618078 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CBX5-206ENST00000618078 MT4P47944 62 aa4.06□□□□□ -1.76
CBX5-206ENST00000618078 MT3P25713 68 aa4.05□□□□□ -1.76
CBX5-206ENST00000618078 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
CBX5-206ENST00000618078 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CBX5-206ENST00000618078 LCE1DQ5T752 114 aa4□□□□□ -1.77
CBX5-206ENST00000618078 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
CBX5-206ENST00000618078 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
CBX5-206ENST00000618078 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
CBX5-206ENST00000618078 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
CBX5-206ENST00000618078 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
CBX5-206ENST00000618078 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
CBX5-206ENST00000618078 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
CBX5-206ENST00000618078 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
CBX5-206ENST00000618078 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
CBX5-206ENST00000618078 PRM1P04553 51 aa3.71□□□□□ -1.82
CBX5-206ENST00000618078 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CBX5-206ENST00000618078 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
CBX5-206ENST00000618078 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CBX5-206ENST00000618078 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
CBX5-206ENST00000618078 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CBX5-206ENST00000618078 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
CBX5-206ENST00000618078 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
CBX5-206ENST00000618078 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
CBX5-206ENST00000618078 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
CBX5-206ENST00000618078 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
CBX5-206ENST00000618078 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
CBX5-206ENST00000618078 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
CBX5-206ENST00000618078 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
CBX5-206ENST00000618078 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
CBX5-206ENST00000618078 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CBX5-206ENST00000618078 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
CBX5-206ENST00000618078 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
CBX5-206ENST00000618078 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
CBX5-206ENST00000618078 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CBX5-206ENST00000618078 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CBX5-206ENST00000618078 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 58.1 ms