RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 KRTAP2-3P0C7H8 128 aa6.79□□□□□ -1.32
PCDHA13-203ENST00000617769 KRTAP2-4Q9BYR9 128 aa6.79□□□□□ -1.32
PCDHA13-203ENST00000617769 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
PCDHA13-203ENST00000617769 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
PCDHA13-203ENST00000617769 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
PCDHA13-203ENST00000617769 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
PCDHA13-203ENST00000617769 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
PCDHA13-203ENST00000617769 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.35
PCDHA13-203ENST00000617769 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.36
PCDHA13-203ENST00000617769 KRTAP19-3Q7Z4W3 81 aa6.57□□□□□ -1.36
PCDHA13-203ENST00000617769 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
PCDHA13-203ENST00000617769 MT1MQ8N339 61 aa6.53□□□□□ -1.36
PCDHA13-203ENST00000617769 MT1GP13640 62 aa6.5□□□□□ -1.37
PCDHA13-203ENST00000617769 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.38
PCDHA13-203ENST00000617769 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
PCDHA13-203ENST00000617769 LCE5AQ5TCM9 118 aa6.4□□□□□ -1.39
PCDHA13-203ENST00000617769 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
PCDHA13-203ENST00000617769 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
PCDHA13-203ENST00000617769 SPRR2EP22531 72 aa6.09□□□□□ -1.43
PCDHA13-203ENST00000617769 SPRR2BP35325 72 aa6.09□□□□□ -1.43
PCDHA13-203ENST00000617769 SPRR2AP35326 72 aa6.09□□□□□ -1.43
PCDHA13-203ENST00000617769 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
PCDHA13-203ENST00000617769 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
PCDHA13-203ENST00000617769 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
PCDHA13-203ENST00000617769 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
PCDHA13-203ENST00000617769 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
PCDHA13-203ENST00000617769 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
PCDHA13-203ENST00000617769 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
PCDHA13-203ENST00000617769 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
PCDHA13-203ENST00000617769 SPRR2DP22532 72 aa5.83□□□□□ -1.48
PCDHA13-203ENST00000617769 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
PCDHA13-203ENST00000617769 MT1AP04731 61 aa5.77□□□□□ -1.49
PCDHA13-203ENST00000617769 LCE3DQ9BYE3 92 aa5.63□□□□□ -1.51
PCDHA13-203ENST00000617769 NEBP20929 6669 aa5.62□□□□□ -1.51
PCDHA13-203ENST00000617769 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
PCDHA13-203ENST00000617769 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
PCDHA13-203ENST00000617769 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
PCDHA13-203ENST00000617769 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
PCDHA13-203ENST00000617769 PRM1P04553 51 aa5.35□□□□□ -1.55
PCDHA13-203ENST00000617769 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
PCDHA13-203ENST00000617769 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
PCDHA13-203ENST00000617769 MT3P25713 68 aa5.21□□□□□ -1.58
PCDHA13-203ENST00000617769 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
PCDHA13-203ENST00000617769 MT4P47944 62 aa5.19□□□□□ -1.58
PCDHA13-203ENST00000617769 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
PCDHA13-203ENST00000617769 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
PCDHA13-203ENST00000617769 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
PCDHA13-203ENST00000617769 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
PCDHA13-203ENST00000617769 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
PCDHA13-203ENST00000617769 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.64
PCDHA13-203ENST00000617769 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
PCDHA13-203ENST00000617769 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
PCDHA13-203ENST00000617769 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
PCDHA13-203ENST00000617769 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
PCDHA13-203ENST00000617769 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
PCDHA13-203ENST00000617769 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
PCDHA13-203ENST00000617769 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
PCDHA13-203ENST00000617769 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.74
PCDHA13-203ENST00000617769 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.74
PCDHA13-203ENST00000617769 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
PCDHA13-203ENST00000617769 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
PCDHA13-203ENST00000617769 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
PCDHA13-203ENST00000617769 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
PCDHA13-203ENST00000617769 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
PCDHA13-203ENST00000617769 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
PCDHA13-203ENST00000617769 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
PCDHA13-203ENST00000617769 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
PCDHA13-203ENST00000617769 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
PCDHA13-203ENST00000617769 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
PCDHA13-203ENST00000617769 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
PCDHA13-203ENST00000617769 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
PCDHA13-203ENST00000617769 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
PCDHA13-203ENST00000617769 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
PCDHA13-203ENST00000617769 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
PCDHA13-203ENST00000617769 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PCDHA13-203ENST00000617769 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
PCDHA13-203ENST00000617769 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 91 ms