RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CCDC179H3BU77 68 aa7.63□□□□□ -1.19
NEDD4L-237ENST00000617539 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
NEDD4L-237ENST00000617539 AHNAK2Q8IVF2 5795 aa7.56□□□□□ -1.2
NEDD4L-237ENST00000617539 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
NEDD4L-237ENST00000617539 KRTAP4-6Q9BYQ5 205 aa7.54□□□□□ -1.2
NEDD4L-237ENST00000617539 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
NEDD4L-237ENST00000617539 ATP5EP56381 51 aaPredicted RBP7.52□□□□□ -1.21
NEDD4L-237ENST00000617539 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
NEDD4L-237ENST00000617539 KRTAP5-10Q6L8G5 202 aa7.41□□□□□ -1.22
NEDD4L-237ENST00000617539 UQCR11O14957 56 aa7.35□□□□□ -1.23
NEDD4L-237ENST00000617539 KRTAP5-5Q701N2 237 aaPredicted RBP7.31□□□□□ -1.24
NEDD4L-237ENST00000617539 TMEM258P61165 79 aa7.27□□□□□ -1.25
NEDD4L-237ENST00000617539 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
NEDD4L-237ENST00000617539 KRTAP20-2Q3LI61 65 aa7.23□□□□□ -1.25
NEDD4L-237ENST00000617539 PCP4P48539 62 aa7.18□□□□□ -1.26
NEDD4L-237ENST00000617539 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
NEDD4L-237ENST00000617539 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
NEDD4L-237ENST00000617539 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
NEDD4L-237ENST00000617539 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.26
NEDD4L-237ENST00000617539 KRTAP5-7Q6L8G8 165 aa7.12□□□□□ -1.27
NEDD4L-237ENST00000617539 KRTAP12-4P60329 112 aa7.06□□□□□ -1.28
NEDD4L-237ENST00000617539 K7ERS5 55 aa7□□□□□ -1.29
NEDD4L-237ENST00000617539 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
NEDD4L-237ENST00000617539 SYNE1Q8NF91 8797 aaKnown RBP6.98□□□□□ -1.29
NEDD4L-237ENST00000617539 PSPHP1O15172 72 aa6.97□□□□□ -1.29
NEDD4L-237ENST00000617539 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
NEDD4L-237ENST00000617539 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
NEDD4L-237ENST00000617539 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
NEDD4L-237ENST00000617539 Q1T7F1 81 aa6.88□□□□□ -1.31
NEDD4L-237ENST00000617539 V9GYY9 64 aa6.87□□□□□ -1.31
NEDD4L-237ENST00000617539 MT1AP04731 61 aa6.71□□□□□ -1.34
NEDD4L-237ENST00000617539 KRTAP6-1Q3LI64 71 aa6.71□□□□□ -1.34
NEDD4L-237ENST00000617539 KRTAP5-2Q701N4 177 aa6.7□□□□□ -1.34
NEDD4L-237ENST00000617539 A6NED7 52 aa6.68□□□□□ -1.34
NEDD4L-237ENST00000617539 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
NEDD4L-237ENST00000617539 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
NEDD4L-237ENST00000617539 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
NEDD4L-237ENST00000617539 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
NEDD4L-237ENST00000617539 ROMO1P60602 79 aa6.56□□□□□ -1.36
NEDD4L-237ENST00000617539 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
NEDD4L-237ENST00000617539 KRTAP5-8O75690 187 aa6.43□□□□□ -1.38
NEDD4L-237ENST00000617539 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
NEDD4L-237ENST00000617539 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
NEDD4L-237ENST00000617539 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
NEDD4L-237ENST00000617539 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
NEDD4L-237ENST00000617539 AHNAKQ09666 5890 aaKnown RBP6.22□□□□□ -1.41
NEDD4L-237ENST00000617539 MT3P25713 68 aa6.11□□□□□ -1.43
NEDD4L-237ENST00000617539 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
NEDD4L-237ENST00000617539 KRTAP5-1Q6L8H4 278 aa6.03□□□□□ -1.44
NEDD4L-237ENST00000617539 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
NEDD4L-237ENST00000617539 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
NEDD4L-237ENST00000617539 LCE1EQ5T753 118 aa5.67□□□□□ -1.5
NEDD4L-237ENST00000617539 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
NEDD4L-237ENST00000617539 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
NEDD4L-237ENST00000617539 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
NEDD4L-237ENST00000617539 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
NEDD4L-237ENST00000617539 LCE1CQ5T751 118 aa5.28□□□□□ -1.56
NEDD4L-237ENST00000617539 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
NEDD4L-237ENST00000617539 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
NEDD4L-237ENST00000617539 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
NEDD4L-237ENST00000617539 LCE3DQ9BYE3 92 aa4.92□□□□□ -1.62
NEDD4L-237ENST00000617539 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
NEDD4L-237ENST00000617539 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
NEDD4L-237ENST00000617539 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
NEDD4L-237ENST00000617539 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
NEDD4L-237ENST00000617539 KRTAP21-2Q3LI59 83 aa4.43□□□□□ -1.7
NEDD4L-237ENST00000617539 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
NEDD4L-237ENST00000617539 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
NEDD4L-237ENST00000617539 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
NEDD4L-237ENST00000617539 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
NEDD4L-237ENST00000617539 MUC19Q7Z5P9 8384 aa3.86□□□□□ -1.79
NEDD4L-237ENST00000617539 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
NEDD4L-237ENST00000617539 INE1O15225 51 aa3.47□□□□□ -1.85
NEDD4L-237ENST00000617539 H3BS24 57 aa3.46□□□□□ -1.86
NEDD4L-237ENST00000617539 PRM1P04553 51 aa3.37□□□□□ -1.87
NEDD4L-237ENST00000617539 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
NEDD4L-237ENST00000617539 MUC16Q8WXI7 14507 aa2.73□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 35.7 ms