RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
DDX1-207ENST00000617198 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
DDX1-207ENST00000617198 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
DDX1-207ENST00000617198 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
DDX1-207ENST00000617198 MT1GP13640 62 aa5.62□□□□□ -1.51
DDX1-207ENST00000617198 MT1MQ8N339 61 aa5.59□□□□□ -1.51
DDX1-207ENST00000617198 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
DDX1-207ENST00000617198 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
DDX1-207ENST00000617198 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
DDX1-207ENST00000617198 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
DDX1-207ENST00000617198 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
DDX1-207ENST00000617198 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
DDX1-207ENST00000617198 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
DDX1-207ENST00000617198 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
DDX1-207ENST00000617198 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
DDX1-207ENST00000617198 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
DDX1-207ENST00000617198 MT1AP04731 61 aa5.13□□□□□ -1.59
DDX1-207ENST00000617198 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
DDX1-207ENST00000617198 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
DDX1-207ENST00000617198 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
DDX1-207ENST00000617198 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
DDX1-207ENST00000617198 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
DDX1-207ENST00000617198 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
DDX1-207ENST00000617198 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
DDX1-207ENST00000617198 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
DDX1-207ENST00000617198 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
DDX1-207ENST00000617198 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
DDX1-207ENST00000617198 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
DDX1-207ENST00000617198 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
DDX1-207ENST00000617198 MDN1Q9NU22 5596 aa4.9□□□□□ -1.63
DDX1-207ENST00000617198 SPRR2EP22531 72 aa4.8□□□□□ -1.64
DDX1-207ENST00000617198 SPRR2BP35325 72 aa4.8□□□□□ -1.64
DDX1-207ENST00000617198 SPRR2AP35326 72 aa4.8□□□□□ -1.64
DDX1-207ENST00000617198 PRM1P04553 51 aa4.76□□□□□ -1.65
DDX1-207ENST00000617198 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
DDX1-207ENST00000617198 SPRR2DP22532 72 aa4.6□□□□□ -1.67
DDX1-207ENST00000617198 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
DDX1-207ENST00000617198 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
DDX1-207ENST00000617198 MT3P25713 68 aa4.54□□□□□ -1.68
DDX1-207ENST00000617198 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
DDX1-207ENST00000617198 NEBP20929 6669 aa4.37□□□□□ -1.71
DDX1-207ENST00000617198 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
DDX1-207ENST00000617198 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
DDX1-207ENST00000617198 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
DDX1-207ENST00000617198 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
DDX1-207ENST00000617198 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
DDX1-207ENST00000617198 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
DDX1-207ENST00000617198 MT4P47944 62 aa4.02□□□□□ -1.77
DDX1-207ENST00000617198 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
DDX1-207ENST00000617198 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
DDX1-207ENST00000617198 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
DDX1-207ENST00000617198 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
DDX1-207ENST00000617198 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
DDX1-207ENST00000617198 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
DDX1-207ENST00000617198 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
DDX1-207ENST00000617198 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
DDX1-207ENST00000617198 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
DDX1-207ENST00000617198 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
DDX1-207ENST00000617198 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
DDX1-207ENST00000617198 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
DDX1-207ENST00000617198 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
DDX1-207ENST00000617198 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
DDX1-207ENST00000617198 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
DDX1-207ENST00000617198 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
DDX1-207ENST00000617198 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
DDX1-207ENST00000617198 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
DDX1-207ENST00000617198 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
DDX1-207ENST00000617198 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
DDX1-207ENST00000617198 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
DDX1-207ENST00000617198 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
DDX1-207ENST00000617198 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
DDX1-207ENST00000617198 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
DDX1-207ENST00000617198 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
DDX1-207ENST00000617198 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
DDX1-207ENST00000617198 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
DDX1-207ENST00000617198 PHGR1C9JFL3 82 aa2.57□□□□□ -2
DDX1-207ENST00000617198 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 204.3 ms