RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 KRTAP4-3Q9BYR4 195 aa7.47□□□□□ -1.21
CLN5-203ENST00000616833 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
CLN5-203ENST00000616833 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
CLN5-203ENST00000616833 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
CLN5-203ENST00000616833 SYNE2Q8WXH0 6885 aaKnown RBP7.28□□□□□ -1.24
CLN5-203ENST00000616833 SPRR2FQ96RM1 72 aa7.27□□□□□ -1.25
CLN5-203ENST00000616833 MT1GP13640 62 aa7.25□□□□□ -1.25
CLN5-203ENST00000616833 KRTAP19-3Q7Z4W3 81 aa7.24□□□□□ -1.25
CLN5-203ENST00000616833 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
CLN5-203ENST00000616833 MT1MQ8N339 61 aa7.22□□□□□ -1.25
CLN5-203ENST00000616833 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
CLN5-203ENST00000616833 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
CLN5-203ENST00000616833 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
CLN5-203ENST00000616833 KRTAP2-1Q9BYU5 128 aa7.1□□□□□ -1.27
CLN5-203ENST00000616833 MDN1Q9NU22 5596 aa7.06□□□□□ -1.28
CLN5-203ENST00000616833 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
CLN5-203ENST00000616833 INE1O15225 51 aa6.99□□□□□ -1.29
CLN5-203ENST00000616833 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
CLN5-203ENST00000616833 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
CLN5-203ENST00000616833 SYNE1Q8NF91 8797 aaKnown RBP6.71□□□□□ -1.33
CLN5-203ENST00000616833 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
CLN5-203ENST00000616833 SPRR2EP22531 72 aa6.69□□□□□ -1.34
CLN5-203ENST00000616833 SPRR2BP35325 72 aa6.69□□□□□ -1.34
CLN5-203ENST00000616833 SPRR2AP35326 72 aa6.69□□□□□ -1.34
CLN5-203ENST00000616833 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
CLN5-203ENST00000616833 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
CLN5-203ENST00000616833 KRTAP6-1Q3LI64 71 aa6.55□□□□□ -1.36
CLN5-203ENST00000616833 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
CLN5-203ENST00000616833 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.38
CLN5-203ENST00000616833 SPRR2DP22532 72 aa6.39□□□□□ -1.39
CLN5-203ENST00000616833 MT1AP04731 61 aa6.37□□□□□ -1.39
CLN5-203ENST00000616833 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
CLN5-203ENST00000616833 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
CLN5-203ENST00000616833 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
CLN5-203ENST00000616833 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
CLN5-203ENST00000616833 NEBP20929 6669 aa6.18□□□□□ -1.42
CLN5-203ENST00000616833 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
CLN5-203ENST00000616833 LCE3DQ9BYE3 92 aa6.02□□□□□ -1.45
CLN5-203ENST00000616833 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
CLN5-203ENST00000616833 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
CLN5-203ENST00000616833 MT4P47944 62 aa5.75□□□□□ -1.49
CLN5-203ENST00000616833 MT3P25713 68 aa5.74□□□□□ -1.49
CLN5-203ENST00000616833 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
CLN5-203ENST00000616833 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
CLN5-203ENST00000616833 PRM1P04553 51 aa5.59□□□□□ -1.51
CLN5-203ENST00000616833 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
CLN5-203ENST00000616833 HMCN1Q96RW7 5635 aa5.48□□□□□ -1.53
CLN5-203ENST00000616833 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
CLN5-203ENST00000616833 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
CLN5-203ENST00000616833 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
CLN5-203ENST00000616833 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
CLN5-203ENST00000616833 KRTAP5-2Q701N4 177 aa5.26□□□□□ -1.57
CLN5-203ENST00000616833 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
CLN5-203ENST00000616833 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
CLN5-203ENST00000616833 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
CLN5-203ENST00000616833 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
CLN5-203ENST00000616833 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
CLN5-203ENST00000616833 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
CLN5-203ENST00000616833 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
CLN5-203ENST00000616833 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
CLN5-203ENST00000616833 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
CLN5-203ENST00000616833 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
CLN5-203ENST00000616833 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
CLN5-203ENST00000616833 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
CLN5-203ENST00000616833 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
CLN5-203ENST00000616833 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
CLN5-203ENST00000616833 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
CLN5-203ENST00000616833 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
CLN5-203ENST00000616833 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
CLN5-203ENST00000616833 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
CLN5-203ENST00000616833 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CLN5-203ENST00000616833 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.8
CLN5-203ENST00000616833 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
CLN5-203ENST00000616833 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CLN5-203ENST00000616833 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
CLN5-203ENST00000616833 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
CLN5-203ENST00000616833 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
CLN5-203ENST00000616833 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 47 ms