RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 UQCR11O14957 56 aa5.01□□□□□ -1.61
UPK1A-203ENST00000616789 H3BS24 57 aa5□□□□□ -1.61
UPK1A-203ENST00000616789 PSPHP1O15172 72 aa4.99□□□□□ -1.61
UPK1A-203ENST00000616789 TNP1P09430 55 aa4.97□□□□□ -1.61
UPK1A-203ENST00000616789 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
UPK1A-203ENST00000616789 MT1GP13640 62 aa4.91□□□□□ -1.62
UPK1A-203ENST00000616789 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
UPK1A-203ENST00000616789 MT1LQ93083 61 aa4.89□□□□□ -1.63
UPK1A-203ENST00000616789 A6NED7 52 aa4.87□□□□□ -1.63
UPK1A-203ENST00000616789 MT1MQ8N339 61 aa4.85□□□□□ -1.63
UPK1A-203ENST00000616789 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
UPK1A-203ENST00000616789 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
UPK1A-203ENST00000616789 K7ERS5 55 aa4.8□□□□□ -1.64
UPK1A-203ENST00000616789 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
UPK1A-203ENST00000616789 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
UPK1A-203ENST00000616789 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
UPK1A-203ENST00000616789 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
UPK1A-203ENST00000616789 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
UPK1A-203ENST00000616789 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
UPK1A-203ENST00000616789 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
UPK1A-203ENST00000616789 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
UPK1A-203ENST00000616789 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
UPK1A-203ENST00000616789 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
UPK1A-203ENST00000616789 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
UPK1A-203ENST00000616789 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
UPK1A-203ENST00000616789 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
UPK1A-203ENST00000616789 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
UPK1A-203ENST00000616789 MT4P47944 62 aa4.53□□□□□ -1.68
UPK1A-203ENST00000616789 ROMO1P60602 79 aa4.5□□□□□ -1.69
UPK1A-203ENST00000616789 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
UPK1A-203ENST00000616789 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
UPK1A-203ENST00000616789 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
UPK1A-203ENST00000616789 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
UPK1A-203ENST00000616789 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
UPK1A-203ENST00000616789 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
UPK1A-203ENST00000616789 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
UPK1A-203ENST00000616789 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
UPK1A-203ENST00000616789 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
UPK1A-203ENST00000616789 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
UPK1A-203ENST00000616789 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
UPK1A-203ENST00000616789 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
UPK1A-203ENST00000616789 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
UPK1A-203ENST00000616789 MT1AP04731 61 aa4.14□□□□□ -1.75
UPK1A-203ENST00000616789 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
UPK1A-203ENST00000616789 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
UPK1A-203ENST00000616789 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
UPK1A-203ENST00000616789 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
UPK1A-203ENST00000616789 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
UPK1A-203ENST00000616789 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
UPK1A-203ENST00000616789 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
UPK1A-203ENST00000616789 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
UPK1A-203ENST00000616789 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
UPK1A-203ENST00000616789 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
UPK1A-203ENST00000616789 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
UPK1A-203ENST00000616789 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
UPK1A-203ENST00000616789 MT3P25713 68 aa3.76□□□□□ -1.81
UPK1A-203ENST00000616789 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
UPK1A-203ENST00000616789 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
UPK1A-203ENST00000616789 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
UPK1A-203ENST00000616789 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
UPK1A-203ENST00000616789 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
UPK1A-203ENST00000616789 INE1O15225 51 aa3.53□□□□□ -1.84
UPK1A-203ENST00000616789 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
UPK1A-203ENST00000616789 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
UPK1A-203ENST00000616789 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
UPK1A-203ENST00000616789 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
UPK1A-203ENST00000616789 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
UPK1A-203ENST00000616789 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
UPK1A-203ENST00000616789 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
UPK1A-203ENST00000616789 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
UPK1A-203ENST00000616789 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
UPK1A-203ENST00000616789 PHGR1C9JFL3 82 aa2.53□□□□□ -2
UPK1A-203ENST00000616789 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
UPK1A-203ENST00000616789 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
UPK1A-203ENST00000616789 PRM1P04553 51 aa2.32□□□□□ -2.04
UPK1A-203ENST00000616789 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
UPK1A-203ENST00000616789 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 64.4 ms