RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
TARDBP-217ENST00000616545 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
TARDBP-217ENST00000616545 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
TARDBP-217ENST00000616545 MT1EP04732 61 aa4.28□□□□□ -1.72
TARDBP-217ENST00000616545 KMT2DO14686 5537 aa4.28□□□□□ -1.72
TARDBP-217ENST00000616545 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
TARDBP-217ENST00000616545 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
TARDBP-217ENST00000616545 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
TARDBP-217ENST00000616545 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
TARDBP-217ENST00000616545 SPRR2EP22531 72 aa4.17□□□□□ -1.74
TARDBP-217ENST00000616545 SPRR2BP35325 72 aa4.17□□□□□ -1.74
TARDBP-217ENST00000616545 SPRR2AP35326 72 aa4.17□□□□□ -1.74
TARDBP-217ENST00000616545 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
TARDBP-217ENST00000616545 MT1GP13640 62 aa4.16□□□□□ -1.74
TARDBP-217ENST00000616545 MT1LQ93083 61 aa4.16□□□□□ -1.74
TARDBP-217ENST00000616545 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
TARDBP-217ENST00000616545 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
TARDBP-217ENST00000616545 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
TARDBP-217ENST00000616545 MT1MQ8N339 61 aa4.04□□□□□ -1.76
TARDBP-217ENST00000616545 NEBP20929 6669 aa4.03□□□□□ -1.76
TARDBP-217ENST00000616545 SPRR2DP22532 72 aa4.03□□□□□ -1.76
TARDBP-217ENST00000616545 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
TARDBP-217ENST00000616545 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
TARDBP-217ENST00000616545 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
TARDBP-217ENST00000616545 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
TARDBP-217ENST00000616545 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
TARDBP-217ENST00000616545 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
TARDBP-217ENST00000616545 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
TARDBP-217ENST00000616545 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
TARDBP-217ENST00000616545 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
TARDBP-217ENST00000616545 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
TARDBP-217ENST00000616545 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
TARDBP-217ENST00000616545 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
TARDBP-217ENST00000616545 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
TARDBP-217ENST00000616545 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
TARDBP-217ENST00000616545 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
TARDBP-217ENST00000616545 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
TARDBP-217ENST00000616545 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
TARDBP-217ENST00000616545 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
TARDBP-217ENST00000616545 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
TARDBP-217ENST00000616545 MT1AP04731 61 aa3.57□□□□□ -1.84
TARDBP-217ENST00000616545 MT3P25713 68 aa3.53□□□□□ -1.84
TARDBP-217ENST00000616545 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
TARDBP-217ENST00000616545 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
TARDBP-217ENST00000616545 MT4P47944 62 aa3.46□□□□□ -1.86
TARDBP-217ENST00000616545 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
TARDBP-217ENST00000616545 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
TARDBP-217ENST00000616545 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
TARDBP-217ENST00000616545 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
TARDBP-217ENST00000616545 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
TARDBP-217ENST00000616545 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
TARDBP-217ENST00000616545 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
TARDBP-217ENST00000616545 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
TARDBP-217ENST00000616545 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
TARDBP-217ENST00000616545 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
TARDBP-217ENST00000616545 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
TARDBP-217ENST00000616545 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
TARDBP-217ENST00000616545 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
TARDBP-217ENST00000616545 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TARDBP-217ENST00000616545 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
TARDBP-217ENST00000616545 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
TARDBP-217ENST00000616545 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
TARDBP-217ENST00000616545 INE1O15225 51 aa2.81□□□□□ -1.96
TARDBP-217ENST00000616545 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
TARDBP-217ENST00000616545 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TARDBP-217ENST00000616545 MUC5ACP98088 5654 aa2.59□□□□□ -2
TARDBP-217ENST00000616545 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
TARDBP-217ENST00000616545 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
TARDBP-217ENST00000616545 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
TARDBP-217ENST00000616545 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-217ENST00000616545 PRM1P04553 51 aa2.37□□□□□ -2.03
TARDBP-217ENST00000616545 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TARDBP-217ENST00000616545 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
TARDBP-217ENST00000616545 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
TARDBP-217ENST00000616545 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
TARDBP-217ENST00000616545 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TARDBP-217ENST00000616545 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms