RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
SYNRG-223ENST00000616179 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
SYNRG-223ENST00000616179 MT1LQ93083 61 aa5.11□□□□□ -1.59
SYNRG-223ENST00000616179 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SYNRG-223ENST00000616179 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
SYNRG-223ENST00000616179 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
SYNRG-223ENST00000616179 MT1EP04732 61 aa5.02□□□□□ -1.61
SYNRG-223ENST00000616179 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
SYNRG-223ENST00000616179 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
SYNRG-223ENST00000616179 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
SYNRG-223ENST00000616179 PRM1P04553 51 aa4.79□□□□□ -1.64
SYNRG-223ENST00000616179 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SYNRG-223ENST00000616179 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
SYNRG-223ENST00000616179 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
SYNRG-223ENST00000616179 MT1MQ8N339 61 aa4.72□□□□□ -1.65
SYNRG-223ENST00000616179 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
SYNRG-223ENST00000616179 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SYNRG-223ENST00000616179 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
SYNRG-223ENST00000616179 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
SYNRG-223ENST00000616179 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
SYNRG-223ENST00000616179 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
SYNRG-223ENST00000616179 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
SYNRG-223ENST00000616179 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
SYNRG-223ENST00000616179 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
SYNRG-223ENST00000616179 MT1AP04731 61 aa4.31□□□□□ -1.72
SYNRG-223ENST00000616179 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
SYNRG-223ENST00000616179 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
SYNRG-223ENST00000616179 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
SYNRG-223ENST00000616179 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
SYNRG-223ENST00000616179 SPRR2EP22531 72 aa4.13□□□□□ -1.75
SYNRG-223ENST00000616179 SPRR2BP35325 72 aa4.13□□□□□ -1.75
SYNRG-223ENST00000616179 SPRR2AP35326 72 aa4.13□□□□□ -1.75
SYNRG-223ENST00000616179 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
SYNRG-223ENST00000616179 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
SYNRG-223ENST00000616179 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SYNRG-223ENST00000616179 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
SYNRG-223ENST00000616179 MT3P25713 68 aa4.03□□□□□ -1.76
SYNRG-223ENST00000616179 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SYNRG-223ENST00000616179 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SYNRG-223ENST00000616179 SPRR2DP22532 72 aa3.91□□□□□ -1.78
SYNRG-223ENST00000616179 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
SYNRG-223ENST00000616179 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
SYNRG-223ENST00000616179 MT4P47944 62 aa3.69□□□□□ -1.82
SYNRG-223ENST00000616179 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
SYNRG-223ENST00000616179 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
SYNRG-223ENST00000616179 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
SYNRG-223ENST00000616179 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
SYNRG-223ENST00000616179 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SYNRG-223ENST00000616179 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
SYNRG-223ENST00000616179 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.89
SYNRG-223ENST00000616179 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
SYNRG-223ENST00000616179 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
SYNRG-223ENST00000616179 NEBP20929 6669 aa3.11□□□□□ -1.91
SYNRG-223ENST00000616179 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SYNRG-223ENST00000616179 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
SYNRG-223ENST00000616179 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
SYNRG-223ENST00000616179 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
SYNRG-223ENST00000616179 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
SYNRG-223ENST00000616179 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
SYNRG-223ENST00000616179 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
SYNRG-223ENST00000616179 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
SYNRG-223ENST00000616179 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
SYNRG-223ENST00000616179 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
SYNRG-223ENST00000616179 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
SYNRG-223ENST00000616179 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
SYNRG-223ENST00000616179 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
SYNRG-223ENST00000616179 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
SYNRG-223ENST00000616179 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
SYNRG-223ENST00000616179 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
SYNRG-223ENST00000616179 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
SYNRG-223ENST00000616179 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
SYNRG-223ENST00000616179 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SYNRG-223ENST00000616179 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SYNRG-223ENST00000616179 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
SYNRG-223ENST00000616179 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
SYNRG-223ENST00000616179 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
SYNRG-223ENST00000616179 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms