RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
CDKN1A-208ENST00000615513 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CDKN1A-208ENST00000615513 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
CDKN1A-208ENST00000615513 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
CDKN1A-208ENST00000615513 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
CDKN1A-208ENST00000615513 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
CDKN1A-208ENST00000615513 MT1GP13640 62 aa4.9□□□□□ -1.62
CDKN1A-208ENST00000615513 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CDKN1A-208ENST00000615513 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
CDKN1A-208ENST00000615513 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
CDKN1A-208ENST00000615513 MACF1Q9UPN3 7388 aaKnown RBP4.8□□□□□ -1.64
CDKN1A-208ENST00000615513 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
CDKN1A-208ENST00000615513 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
CDKN1A-208ENST00000615513 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
CDKN1A-208ENST00000615513 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
CDKN1A-208ENST00000615513 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
CDKN1A-208ENST00000615513 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
CDKN1A-208ENST00000615513 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
CDKN1A-208ENST00000615513 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
CDKN1A-208ENST00000615513 MDN1Q9NU22 5596 aa4.47□□□□□ -1.69
CDKN1A-208ENST00000615513 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.69
CDKN1A-208ENST00000615513 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
CDKN1A-208ENST00000615513 SPRR2EP22531 72 aa4.4□□□□□ -1.7
CDKN1A-208ENST00000615513 SPRR2BP35325 72 aa4.4□□□□□ -1.7
CDKN1A-208ENST00000615513 SPRR2AP35326 72 aa4.4□□□□□ -1.7
CDKN1A-208ENST00000615513 MT1AP04731 61 aa4.38□□□□□ -1.71
CDKN1A-208ENST00000615513 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
CDKN1A-208ENST00000615513 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
CDKN1A-208ENST00000615513 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
CDKN1A-208ENST00000615513 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
CDKN1A-208ENST00000615513 NEBP20929 6669 aa4.31□□□□□ -1.72
CDKN1A-208ENST00000615513 SPRR2DP22532 72 aa4.23□□□□□ -1.73
CDKN1A-208ENST00000615513 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
CDKN1A-208ENST00000615513 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
CDKN1A-208ENST00000615513 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CDKN1A-208ENST00000615513 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CDKN1A-208ENST00000615513 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
CDKN1A-208ENST00000615513 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
CDKN1A-208ENST00000615513 MT3P25713 68 aa3.95□□□□□ -1.78
CDKN1A-208ENST00000615513 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
CDKN1A-208ENST00000615513 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
CDKN1A-208ENST00000615513 PRM1P04553 51 aa3.86□□□□□ -1.79
CDKN1A-208ENST00000615513 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
CDKN1A-208ENST00000615513 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
CDKN1A-208ENST00000615513 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
CDKN1A-208ENST00000615513 MT4P47944 62 aa3.67□□□□□ -1.82
CDKN1A-208ENST00000615513 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
CDKN1A-208ENST00000615513 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.82
CDKN1A-208ENST00000615513 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
CDKN1A-208ENST00000615513 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
CDKN1A-208ENST00000615513 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
CDKN1A-208ENST00000615513 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
CDKN1A-208ENST00000615513 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
CDKN1A-208ENST00000615513 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
CDKN1A-208ENST00000615513 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
CDKN1A-208ENST00000615513 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
CDKN1A-208ENST00000615513 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
CDKN1A-208ENST00000615513 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CDKN1A-208ENST00000615513 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
CDKN1A-208ENST00000615513 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
CDKN1A-208ENST00000615513 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
CDKN1A-208ENST00000615513 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
CDKN1A-208ENST00000615513 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
CDKN1A-208ENST00000615513 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CDKN1A-208ENST00000615513 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
CDKN1A-208ENST00000615513 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
CDKN1A-208ENST00000615513 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
CDKN1A-208ENST00000615513 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
CDKN1A-208ENST00000615513 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
CDKN1A-208ENST00000615513 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CDKN1A-208ENST00000615513 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
CDKN1A-208ENST00000615513 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
CDKN1A-208ENST00000615513 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CDKN1A-208ENST00000615513 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
CDKN1A-208ENST00000615513 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
CDKN1A-208ENST00000615513 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CDKN1A-208ENST00000615513 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 110 ms