RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
TNFAIP3-208ENST00000615468 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
TNFAIP3-208ENST00000615468 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
TNFAIP3-208ENST00000615468 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
TNFAIP3-208ENST00000615468 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
TNFAIP3-208ENST00000615468 MT1LQ93083 61 aa3.35□□□□□ -1.87
TNFAIP3-208ENST00000615468 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
TNFAIP3-208ENST00000615468 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
TNFAIP3-208ENST00000615468 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
TNFAIP3-208ENST00000615468 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
TNFAIP3-208ENST00000615468 MT1GP13640 62 aa3.31□□□□□ -1.88
TNFAIP3-208ENST00000615468 MT1EP04732 61 aa3.3□□□□□ -1.88
TNFAIP3-208ENST00000615468 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
TNFAIP3-208ENST00000615468 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
TNFAIP3-208ENST00000615468 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
TNFAIP3-208ENST00000615468 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
TNFAIP3-208ENST00000615468 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
TNFAIP3-208ENST00000615468 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
TNFAIP3-208ENST00000615468 PRM1P04553 51 aa3.16□□□□□ -1.9
TNFAIP3-208ENST00000615468 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
TNFAIP3-208ENST00000615468 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
TNFAIP3-208ENST00000615468 MT1MQ8N339 61 aa3.12□□□□□ -1.91
TNFAIP3-208ENST00000615468 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
TNFAIP3-208ENST00000615468 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.92
TNFAIP3-208ENST00000615468 SPRR2EP22531 72 aa3.08□□□□□ -1.92
TNFAIP3-208ENST00000615468 SPRR2BP35325 72 aa3.08□□□□□ -1.92
TNFAIP3-208ENST00000615468 SPRR2AP35326 72 aa3.08□□□□□ -1.92
TNFAIP3-208ENST00000615468 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
TNFAIP3-208ENST00000615468 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
TNFAIP3-208ENST00000615468 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
TNFAIP3-208ENST00000615468 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
TNFAIP3-208ENST00000615468 SPRR2DP22532 72 aa2.96□□□□□ -1.94
TNFAIP3-208ENST00000615468 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
TNFAIP3-208ENST00000615468 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
TNFAIP3-208ENST00000615468 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
TNFAIP3-208ENST00000615468 MT1AP04731 61 aa2.93□□□□□ -1.94
TNFAIP3-208ENST00000615468 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
TNFAIP3-208ENST00000615468 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
TNFAIP3-208ENST00000615468 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
TNFAIP3-208ENST00000615468 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
TNFAIP3-208ENST00000615468 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
TNFAIP3-208ENST00000615468 MT4P47944 62 aa2.69□□□□□ -1.98
TNFAIP3-208ENST00000615468 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
TNFAIP3-208ENST00000615468 NEBP20929 6669 aa2.66□□□□□ -1.98
TNFAIP3-208ENST00000615468 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
TNFAIP3-208ENST00000615468 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
TNFAIP3-208ENST00000615468 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
TNFAIP3-208ENST00000615468 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
TNFAIP3-208ENST00000615468 MT3P25713 68 aa2.54□□□□□ -2
TNFAIP3-208ENST00000615468 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
TNFAIP3-208ENST00000615468 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
TNFAIP3-208ENST00000615468 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
TNFAIP3-208ENST00000615468 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
TNFAIP3-208ENST00000615468 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
TNFAIP3-208ENST00000615468 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
TNFAIP3-208ENST00000615468 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
TNFAIP3-208ENST00000615468 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
TNFAIP3-208ENST00000615468 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
TNFAIP3-208ENST00000615468 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
TNFAIP3-208ENST00000615468 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
TNFAIP3-208ENST00000615468 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
TNFAIP3-208ENST00000615468 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
TNFAIP3-208ENST00000615468 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
TNFAIP3-208ENST00000615468 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
TNFAIP3-208ENST00000615468 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
TNFAIP3-208ENST00000615468 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
TNFAIP3-208ENST00000615468 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
TNFAIP3-208ENST00000615468 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
TNFAIP3-208ENST00000615468 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
TNFAIP3-208ENST00000615468 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TNFAIP3-208ENST00000615468 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
TNFAIP3-208ENST00000615468 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
TNFAIP3-208ENST00000615468 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
TNFAIP3-208ENST00000615468 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
TNFAIP3-208ENST00000615468 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
TNFAIP3-208ENST00000615468 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
TNFAIP3-208ENST00000615468 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms