RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
MMP28-204ENST00000615136 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
MMP28-204ENST00000615136 SYNE2Q8WXH0 6885 aaKnown RBP6.68□□□□□ -1.34
MMP28-204ENST00000615136 INE1O15225 51 aa6.67□□□□□ -1.34
MMP28-204ENST00000615136 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
MMP28-204ENST00000615136 KRTAP9-6A8MVA2 160 aa6.61□□□□□ -1.35
MMP28-204ENST00000615136 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
MMP28-204ENST00000615136 KRTAP19-3Q7Z4W3 81 aa6.47□□□□□ -1.37
MMP28-204ENST00000615136 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
MMP28-204ENST00000615136 MT1MQ8N339 61 aa6.42□□□□□ -1.38
MMP28-204ENST00000615136 MT1GP13640 62 aa6.4□□□□□ -1.39
MMP28-204ENST00000615136 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
MMP28-204ENST00000615136 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
MMP28-204ENST00000615136 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
MMP28-204ENST00000615136 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
MMP28-204ENST00000615136 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
MMP28-204ENST00000615136 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
MMP28-204ENST00000615136 KRTAP9-7A8MTY7 169 aa6.32□□□□□ -1.4
MMP28-204ENST00000615136 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
MMP28-204ENST00000615136 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
MMP28-204ENST00000615136 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
MMP28-204ENST00000615136 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
MMP28-204ENST00000615136 SPRR2EP22531 72 aa6.1□□□□□ -1.43
MMP28-204ENST00000615136 SPRR2BP35325 72 aa6.1□□□□□ -1.43
MMP28-204ENST00000615136 SPRR2AP35326 72 aa6.1□□□□□ -1.43
MMP28-204ENST00000615136 NEBP20929 6669 aa5.99□□□□□ -1.45
MMP28-204ENST00000615136 SPRR2DP22532 72 aa5.87□□□□□ -1.47
MMP28-204ENST00000615136 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
MMP28-204ENST00000615136 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
MMP28-204ENST00000615136 MT1AP04731 61 aa5.67□□□□□ -1.5
MMP28-204ENST00000615136 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
MMP28-204ENST00000615136 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
MMP28-204ENST00000615136 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
MMP28-204ENST00000615136 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
MMP28-204ENST00000615136 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
MMP28-204ENST00000615136 KRTAP2-2Q9BYT5 123 aa5.42□□□□□ -1.54
MMP28-204ENST00000615136 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
MMP28-204ENST00000615136 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
MMP28-204ENST00000615136 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
MMP28-204ENST00000615136 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.57
MMP28-204ENST00000615136 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
MMP28-204ENST00000615136 MT4P47944 62 aa5.17□□□□□ -1.58
MMP28-204ENST00000615136 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
MMP28-204ENST00000615136 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
MMP28-204ENST00000615136 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
MMP28-204ENST00000615136 MT3P25713 68 aa5.09□□□□□ -1.59
MMP28-204ENST00000615136 HMCN1Q96RW7 5635 aa5.08□□□□□ -1.6
MMP28-204ENST00000615136 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
MMP28-204ENST00000615136 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
MMP28-204ENST00000615136 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
MMP28-204ENST00000615136 PRM1P04553 51 aa4.85□□□□□ -1.63
MMP28-204ENST00000615136 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
MMP28-204ENST00000615136 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
MMP28-204ENST00000615136 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
MMP28-204ENST00000615136 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
MMP28-204ENST00000615136 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
MMP28-204ENST00000615136 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
MMP28-204ENST00000615136 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
MMP28-204ENST00000615136 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
MMP28-204ENST00000615136 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
MMP28-204ENST00000615136 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
MMP28-204ENST00000615136 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
MMP28-204ENST00000615136 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
MMP28-204ENST00000615136 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
MMP28-204ENST00000615136 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
MMP28-204ENST00000615136 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
MMP28-204ENST00000615136 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
MMP28-204ENST00000615136 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
MMP28-204ENST00000615136 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
MMP28-204ENST00000615136 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
MMP28-204ENST00000615136 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
MMP28-204ENST00000615136 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
MMP28-204ENST00000615136 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
MMP28-204ENST00000615136 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
MMP28-204ENST00000615136 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
MMP28-204ENST00000615136 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
MMP28-204ENST00000615136 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 64.1 ms