RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 SPRR2EP22531 72 aa1.36□□□□□ -2.19
LTN1-207ENST00000614971 SPRR2BP35325 72 aa1.36□□□□□ -2.19
LTN1-207ENST00000614971 SPRR2AP35326 72 aa1.36□□□□□ -2.19
LTN1-207ENST00000614971 KRTAP4-3Q9BYR4 195 aa1.33□□□□□ -2.2
LTN1-207ENST00000614971 INE1O15225 51 aa1.33□□□□□ -2.2
LTN1-207ENST00000614971 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
LTN1-207ENST00000614971 LOC100996750A0A140TA64 210 aa1.31□□□□□ -2.2
LTN1-207ENST00000614971 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
LTN1-207ENST00000614971 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
LTN1-207ENST00000614971 LCE2DQ5TA82 110 aaPredicted RBP1.3□□□□□ -2.2
LTN1-207ENST00000614971 KRTAP9-2Q9BYQ4 174 aa1.3□□□□□ -2.2
LTN1-207ENST00000614971 SPRR2DP22532 72 aa1.29□□□□□ -2.2
LTN1-207ENST00000614971 LCE2AQ5TA79 106 aaPredicted RBP1.27□□□□□ -2.21
LTN1-207ENST00000614971 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
LTN1-207ENST00000614971 MT1LQ93083 61 aa1.26□□□□□ -2.21
LTN1-207ENST00000614971 MT1EP04732 61 aa1.25□□□□□ -2.21
LTN1-207ENST00000614971 MT4P47944 62 aa1.25□□□□□ -2.21
LTN1-207ENST00000614971 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
LTN1-207ENST00000614971 KRTAP4-9Q9BYQ8 210 aa1.23□□□□□ -2.21
LTN1-207ENST00000614971 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
LTN1-207ENST00000614971 MT1MQ8N339 61 aa1.21□□□□□ -2.22
LTN1-207ENST00000614971 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
LTN1-207ENST00000614971 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
LTN1-207ENST00000614971 SPRR5A0A1B0GTR4 108 aa1.2□□□□□ -2.22
LTN1-207ENST00000614971 LCE3DQ9BYE3 92 aa1.18□□□□□ -2.22
LTN1-207ENST00000614971 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
LTN1-207ENST00000614971 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
LTN1-207ENST00000614971 KRTAP9-6A0A140TA67 174 aa1.17□□□□□ -2.22
LTN1-207ENST00000614971 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
LTN1-207ENST00000614971 LCE1DQ5T752 114 aa1.14□□□□□ -2.23
LTN1-207ENST00000614971 LCE3EQ5T5B0 92 aa1.14□□□□□ -2.23
LTN1-207ENST00000614971 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP9-7A8MTY7 169 aa1.13□□□□□ -2.23
LTN1-207ENST00000614971 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.11□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
LTN1-207ENST00000614971 PRM1P04553 51 aa1.1□□□□□ -2.23
LTN1-207ENST00000614971 LCE1AQ5T7P2 110 aa1.1□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP19-4Q3LI73 84 aa1.09□□□□□ -2.23
LTN1-207ENST00000614971 KRTAP4-6Q9BYQ5 205 aa1.09□□□□□ -2.24
LTN1-207ENST00000614971 MT3P25713 68 aa1.08□□□□□ -2.24
LTN1-207ENST00000614971 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
LTN1-207ENST00000614971 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
LTN1-207ENST00000614971 LCE5AQ5TCM9 118 aa1.07□□□□□ -2.24
LTN1-207ENST00000614971 MT1AP04731 61 aa1.06□□□□□ -2.24
LTN1-207ENST00000614971 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
LTN1-207ENST00000614971 NEBP20929 6669 aa1.04□□□□□ -2.24
LTN1-207ENST00000614971 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
LTN1-207ENST00000614971 KRTAP5-9P26371 169 aa1.02□□□□□ -2.25
LTN1-207ENST00000614971 KRTAP6-3Q3LI67 103 aa1.02□□□□□ -2.25
LTN1-207ENST00000614971 KRTAP5-5Q701N2 237 aaPredicted RBP0.99□□□□□ -2.25
LTN1-207ENST00000614971 KRTAP9-4Q9BYQ2 154 aa0.98□□□□□ -2.25
LTN1-207ENST00000614971 KRTAP2-2Q9BYT5 123 aa0.97□□□□□ -2.25
LTN1-207ENST00000614971 LCE1CQ5T751 118 aa0.96□□□□□ -2.26
LTN1-207ENST00000614971 LCE1EQ5T753 118 aa0.96□□□□□ -2.26
LTN1-207ENST00000614971 LCE1FQ5T754 118 aa0.96□□□□□ -2.26
LTN1-207ENST00000614971 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
LTN1-207ENST00000614971 KRTAP5-8O75690 187 aa0.92□□□□□ -2.26
LTN1-207ENST00000614971 LCE4AQ5TA78 99 aa0.92□□□□□ -2.26
LTN1-207ENST00000614971 KRTAP4-4Q9BYR3 166 aa0.9□□□□□ -2.27
LTN1-207ENST00000614971 KRTAP5-1Q6L8H4 278 aa0.89□□□□□ -2.27
LTN1-207ENST00000614971 KRTAP4-2Q9BYR5 136 aa0.89□□□□□ -2.27
LTN1-207ENST00000614971 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
LTN1-207ENST00000614971 KRTAP9-9Q9BYP9 154 aa0.88□□□□□ -2.27
LTN1-207ENST00000614971 KRTAP4-11Q9BYQ6 195 aa0.87□□□□□ -2.27
LTN1-207ENST00000614971 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
LTN1-207ENST00000614971 KRTAP5-3Q6L8H2 238 aa0.82□□□□□ -2.28
LTN1-207ENST00000614971 KRTAP5-7Q6L8G8 165 aa0.66□□□□□ -2.3
LTN1-207ENST00000614971 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
LTN1-207ENST00000614971 PHGR1C9JFL3 82 aa0.59□□□□□ -2.32
LTN1-207ENST00000614971 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
LTN1-207ENST00000614971 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
LTN1-207ENST00000614971 KRTAP5-11Q6L8G4 156 aa0.54□□□□□ -2.32
LTN1-207ENST00000614971 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 65.2 ms