RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 INE1O15225 51 aa6.61□□□□□ -1.35
SMARCD2-212ENST00000613943 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
SMARCD2-212ENST00000613943 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
SMARCD2-212ENST00000613943 DSTQ03001 7570 aaKnown RBP6.56□□□□□ -1.36
SMARCD2-212ENST00000613943 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
SMARCD2-212ENST00000613943 MT1GP13640 62 aa6.51□□□□□ -1.37
SMARCD2-212ENST00000613943 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
SMARCD2-212ENST00000613943 MT1MQ8N339 61 aa6.51□□□□□ -1.37
SMARCD2-212ENST00000613943 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
SMARCD2-212ENST00000613943 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
SMARCD2-212ENST00000613943 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
SMARCD2-212ENST00000613943 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
SMARCD2-212ENST00000613943 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
SMARCD2-212ENST00000613943 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
SMARCD2-212ENST00000613943 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
SMARCD2-212ENST00000613943 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
SMARCD2-212ENST00000613943 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
SMARCD2-212ENST00000613943 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
SMARCD2-212ENST00000613943 KRTAP5-9P26371 169 aa6□□□□□ -1.45
SMARCD2-212ENST00000613943 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SMARCD2-212ENST00000613943 SPRR2EP22531 72 aa5.94□□□□□ -1.46
SMARCD2-212ENST00000613943 SPRR2BP35325 72 aa5.94□□□□□ -1.46
SMARCD2-212ENST00000613943 SPRR2AP35326 72 aa5.94□□□□□ -1.46
SMARCD2-212ENST00000613943 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
SMARCD2-212ENST00000613943 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
SMARCD2-212ENST00000613943 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
SMARCD2-212ENST00000613943 MT1AP04731 61 aa5.76□□□□□ -1.49
SMARCD2-212ENST00000613943 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
SMARCD2-212ENST00000613943 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
SMARCD2-212ENST00000613943 SPRR2DP22532 72 aa5.67□□□□□ -1.5
SMARCD2-212ENST00000613943 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
SMARCD2-212ENST00000613943 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
SMARCD2-212ENST00000613943 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
SMARCD2-212ENST00000613943 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
SMARCD2-212ENST00000613943 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
SMARCD2-212ENST00000613943 LCE3EQ5T5B0 92 aa5.36□□□□□ -1.55
SMARCD2-212ENST00000613943 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
SMARCD2-212ENST00000613943 NEBP20929 6669 aa5.32□□□□□ -1.56
SMARCD2-212ENST00000613943 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
SMARCD2-212ENST00000613943 MT3P25713 68 aa5.18□□□□□ -1.58
SMARCD2-212ENST00000613943 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
SMARCD2-212ENST00000613943 PRM1P04553 51 aa5.09□□□□□ -1.59
SMARCD2-212ENST00000613943 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
SMARCD2-212ENST00000613943 MT4P47944 62 aa5.08□□□□□ -1.6
SMARCD2-212ENST00000613943 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
SMARCD2-212ENST00000613943 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
SMARCD2-212ENST00000613943 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SMARCD2-212ENST00000613943 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
SMARCD2-212ENST00000613943 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
SMARCD2-212ENST00000613943 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
SMARCD2-212ENST00000613943 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
SMARCD2-212ENST00000613943 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
SMARCD2-212ENST00000613943 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
SMARCD2-212ENST00000613943 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
SMARCD2-212ENST00000613943 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
SMARCD2-212ENST00000613943 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SMARCD2-212ENST00000613943 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
SMARCD2-212ENST00000613943 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
SMARCD2-212ENST00000613943 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
SMARCD2-212ENST00000613943 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
SMARCD2-212ENST00000613943 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
SMARCD2-212ENST00000613943 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
SMARCD2-212ENST00000613943 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
SMARCD2-212ENST00000613943 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
SMARCD2-212ENST00000613943 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
SMARCD2-212ENST00000613943 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
SMARCD2-212ENST00000613943 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
SMARCD2-212ENST00000613943 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
SMARCD2-212ENST00000613943 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.84
SMARCD2-212ENST00000613943 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
SMARCD2-212ENST00000613943 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
SMARCD2-212ENST00000613943 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SMARCD2-212ENST00000613943 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
SMARCD2-212ENST00000613943 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
SMARCD2-212ENST00000613943 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
SMARCD2-212ENST00000613943 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SMARCD2-212ENST00000613943 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 133.1 ms