RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 NEBP20929 6669 aa3.1□□□□□ -1.91
CDKAL1-204ENST00000613575 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
CDKAL1-204ENST00000613575 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
CDKAL1-204ENST00000613575 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
CDKAL1-204ENST00000613575 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
CDKAL1-204ENST00000613575 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
CDKAL1-204ENST00000613575 KRTAP10-5P60370 271 aa3□□□□□ -1.93
CDKAL1-204ENST00000613575 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
CDKAL1-204ENST00000613575 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
CDKAL1-204ENST00000613575 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
CDKAL1-204ENST00000613575 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
CDKAL1-204ENST00000613575 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
CDKAL1-204ENST00000613575 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
CDKAL1-204ENST00000613575 USH2AO75445 5202 aa2.89□□□□□ -1.95
CDKAL1-204ENST00000613575 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
CDKAL1-204ENST00000613575 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
CDKAL1-204ENST00000613575 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
CDKAL1-204ENST00000613575 TNP1P09430 55 aa2.82□□□□□ -1.96
CDKAL1-204ENST00000613575 SPRR2GQ9BYE4 73 aa2.82□□□□□ -1.96
CDKAL1-204ENST00000613575 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
CDKAL1-204ENST00000613575 MT1HP80294 61 aa2.77□□□□□ -1.97
CDKAL1-204ENST00000613575 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
CDKAL1-204ENST00000613575 KMT2DO14686 5537 aa2.73□□□□□ -1.97
CDKAL1-204ENST00000613575 MT2AP02795 61 aa2.72□□□□□ -1.97
CDKAL1-204ENST00000613575 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
CDKAL1-204ENST00000613575 M0R2T5 61 aa2.7□□□□□ -1.98
CDKAL1-204ENST00000613575 MT1FP04733 61 aa2.7□□□□□ -1.98
CDKAL1-204ENST00000613575 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
CDKAL1-204ENST00000613575 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CDKAL1-204ENST00000613575 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
CDKAL1-204ENST00000613575 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
CDKAL1-204ENST00000613575 MT1BP07438 61 aa2.63□□□□□ -1.99
CDKAL1-204ENST00000613575 MT1XP80297 61 aa2.6□□□□□ -1.99
CDKAL1-204ENST00000613575 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -2
CDKAL1-204ENST00000613575 LCE3AQ5TA76 89 aa2.57□□□□□ -2
CDKAL1-204ENST00000613575 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
CDKAL1-204ENST00000613575 MDN1Q9NU22 5596 aa2.55□□□□□ -2
CDKAL1-204ENST00000613575 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
CDKAL1-204ENST00000613575 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
CDKAL1-204ENST00000613575 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
CDKAL1-204ENST00000613575 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
CDKAL1-204ENST00000613575 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
CDKAL1-204ENST00000613575 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CDKAL1-204ENST00000613575 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
CDKAL1-204ENST00000613575 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
CDKAL1-204ENST00000613575 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
CDKAL1-204ENST00000613575 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
CDKAL1-204ENST00000613575 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
CDKAL1-204ENST00000613575 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.05
CDKAL1-204ENST00000613575 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
CDKAL1-204ENST00000613575 MT1EP04732 61 aa2.26□□□□□ -2.05
CDKAL1-204ENST00000613575 MT1LQ93083 61 aa2.25□□□□□ -2.05
CDKAL1-204ENST00000613575 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
CDKAL1-204ENST00000613575 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
CDKAL1-204ENST00000613575 SPRR2EP22531 72 aa2.18□□□□□ -2.06
CDKAL1-204ENST00000613575 SPRR2BP35325 72 aa2.18□□□□□ -2.06
CDKAL1-204ENST00000613575 SPRR2AP35326 72 aa2.18□□□□□ -2.06
CDKAL1-204ENST00000613575 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CDKAL1-204ENST00000613575 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
CDKAL1-204ENST00000613575 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
CDKAL1-204ENST00000613575 MT1GP13640 62 aa2.15□□□□□ -2.07
CDKAL1-204ENST00000613575 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
CDKAL1-204ENST00000613575 SPRR2DP22532 72 aa2.12□□□□□ -2.07
CDKAL1-204ENST00000613575 MT1MQ8N339 61 aa2.1□□□□□ -2.07
CDKAL1-204ENST00000613575 PRM1P04553 51 aa2.02□□□□□ -2.09
CDKAL1-204ENST00000613575 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
CDKAL1-204ENST00000613575 MT4P47944 62 aa1.93□□□□□ -2.1
CDKAL1-204ENST00000613575 MT1AP04731 61 aa1.92□□□□□ -2.1
CDKAL1-204ENST00000613575 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CDKAL1-204ENST00000613575 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
CDKAL1-204ENST00000613575 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
CDKAL1-204ENST00000613575 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
CDKAL1-204ENST00000613575 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
CDKAL1-204ENST00000613575 KRTAP20-2Q3LI61 65 aa1.61□□□□□ -2.15
CDKAL1-204ENST00000613575 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CDKAL1-204ENST00000613575 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
CDKAL1-204ENST00000613575 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 66.9 ms