RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
SEMA6C-209ENST00000613223 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
SEMA6C-209ENST00000613223 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
SEMA6C-209ENST00000613223 KRTAP9-6A8MVA2 160 aa6.09□□□□□ -1.43
SEMA6C-209ENST00000613223 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
SEMA6C-209ENST00000613223 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
SEMA6C-209ENST00000613223 MT1GP13640 62 aa6.06□□□□□ -1.44
SEMA6C-209ENST00000613223 MT1MQ8N339 61 aa6.02□□□□□ -1.45
SEMA6C-209ENST00000613223 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
SEMA6C-209ENST00000613223 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
SEMA6C-209ENST00000613223 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
SEMA6C-209ENST00000613223 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
SEMA6C-209ENST00000613223 KRTAP2-1Q9BYU5 128 aa5.95□□□□□ -1.46
SEMA6C-209ENST00000613223 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
SEMA6C-209ENST00000613223 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
SEMA6C-209ENST00000613223 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
SEMA6C-209ENST00000613223 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
SEMA6C-209ENST00000613223 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
SEMA6C-209ENST00000613223 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
SEMA6C-209ENST00000613223 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
SEMA6C-209ENST00000613223 SPRR2EP22531 72 aa5.69□□□□□ -1.5
SEMA6C-209ENST00000613223 SPRR2BP35325 72 aa5.69□□□□□ -1.5
SEMA6C-209ENST00000613223 SPRR2AP35326 72 aa5.69□□□□□ -1.5
SEMA6C-209ENST00000613223 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SEMA6C-209ENST00000613223 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
SEMA6C-209ENST00000613223 SPRR2DP22532 72 aa5.47□□□□□ -1.53
SEMA6C-209ENST00000613223 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.55
SEMA6C-209ENST00000613223 NEBP20929 6669 aa5.38□□□□□ -1.55
SEMA6C-209ENST00000613223 MT1AP04731 61 aa5.37□□□□□ -1.55
SEMA6C-209ENST00000613223 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
SEMA6C-209ENST00000613223 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
SEMA6C-209ENST00000613223 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
SEMA6C-209ENST00000613223 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
SEMA6C-209ENST00000613223 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
SEMA6C-209ENST00000613223 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
SEMA6C-209ENST00000613223 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
SEMA6C-209ENST00000613223 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
SEMA6C-209ENST00000613223 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
SEMA6C-209ENST00000613223 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
SEMA6C-209ENST00000613223 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
SEMA6C-209ENST00000613223 MT3P25713 68 aa4.85□□□□□ -1.63
SEMA6C-209ENST00000613223 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
SEMA6C-209ENST00000613223 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
SEMA6C-209ENST00000613223 MT4P47944 62 aa4.76□□□□□ -1.65
SEMA6C-209ENST00000613223 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
SEMA6C-209ENST00000613223 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
SEMA6C-209ENST00000613223 PRM1P04553 51 aa4.62□□□□□ -1.67
SEMA6C-209ENST00000613223 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
SEMA6C-209ENST00000613223 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
SEMA6C-209ENST00000613223 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.68
SEMA6C-209ENST00000613223 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
SEMA6C-209ENST00000613223 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
SEMA6C-209ENST00000613223 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
SEMA6C-209ENST00000613223 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
SEMA6C-209ENST00000613223 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
SEMA6C-209ENST00000613223 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
SEMA6C-209ENST00000613223 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
SEMA6C-209ENST00000613223 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SEMA6C-209ENST00000613223 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
SEMA6C-209ENST00000613223 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
SEMA6C-209ENST00000613223 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
SEMA6C-209ENST00000613223 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
SEMA6C-209ENST00000613223 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
SEMA6C-209ENST00000613223 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
SEMA6C-209ENST00000613223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
SEMA6C-209ENST00000613223 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
SEMA6C-209ENST00000613223 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
SEMA6C-209ENST00000613223 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
SEMA6C-209ENST00000613223 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
SEMA6C-209ENST00000613223 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
SEMA6C-209ENST00000613223 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
SEMA6C-209ENST00000613223 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.92
SEMA6C-209ENST00000613223 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
SEMA6C-209ENST00000613223 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SEMA6C-209ENST00000613223 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
SEMA6C-209ENST00000613223 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SEMA6C-209ENST00000613223 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms