RNA–Protein interactions for RNA: ENST00000613023.1

RNVU1-19-201, Transcript of RNA, variant U1 small nuclear 19, humanhuman

BASIC

Gene RNVU1-19, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-19-201ENST00000613023 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
RNVU1-19-201ENST00000613023 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
RNVU1-19-201ENST00000613023 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
RNVU1-19-201ENST00000613023 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
RNVU1-19-201ENST00000613023 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
RNVU1-19-201ENST00000613023 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
RNVU1-19-201ENST00000613023 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
RNVU1-19-201ENST00000613023 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.95
RNVU1-19-201ENST00000613023 MT1LQ93083 61 aa2.84□□□□□ -1.95
RNVU1-19-201ENST00000613023 MT1GP13640 62 aa2.83□□□□□ -1.96
RNVU1-19-201ENST00000613023 SPRR2EP22531 72 aa2.82□□□□□ -1.96
RNVU1-19-201ENST00000613023 SPRR2BP35325 72 aa2.82□□□□□ -1.96
RNVU1-19-201ENST00000613023 SPRR2AP35326 72 aa2.82□□□□□ -1.96
RNVU1-19-201ENST00000613023 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
RNVU1-19-201ENST00000613023 MT1MQ8N339 61 aa2.76□□□□□ -1.97
RNVU1-19-201ENST00000613023 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
RNVU1-19-201ENST00000613023 SPRR2DP22532 72 aa2.72□□□□□ -1.97
RNVU1-19-201ENST00000613023 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
RNVU1-19-201ENST00000613023 NEBP20929 6669 aa2.7□□□□□ -1.98
RNVU1-19-201ENST00000613023 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
RNVU1-19-201ENST00000613023 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
RNVU1-19-201ENST00000613023 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
RNVU1-19-201ENST00000613023 KRTAP4-7Q9BYR0 210 aa2.64□□□□□ -1.99
RNVU1-19-201ENST00000613023 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
RNVU1-19-201ENST00000613023 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
RNVU1-19-201ENST00000613023 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
RNVU1-19-201ENST00000613023 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
RNVU1-19-201ENST00000613023 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
RNVU1-19-201ENST00000613023 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
RNVU1-19-201ENST00000613023 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
RNVU1-19-201ENST00000613023 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
RNVU1-19-201ENST00000613023 LOC100996750A0A140TA64 210 aa2.49□□□□□ -2.01
RNVU1-19-201ENST00000613023 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
RNVU1-19-201ENST00000613023 MT1AP04731 61 aa2.44□□□□□ -2.02
RNVU1-19-201ENST00000613023 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
RNVU1-19-201ENST00000613023 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
RNVU1-19-201ENST00000613023 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
RNVU1-19-201ENST00000613023 MT4P47944 62 aa2.32□□□□□ -2.04
RNVU1-19-201ENST00000613023 KRTAP9-4Q9BYQ2 154 aa2.32□□□□□ -2.04
RNVU1-19-201ENST00000613023 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
RNVU1-19-201ENST00000613023 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
RNVU1-19-201ENST00000613023 KRTAP4-9Q9BYQ8 210 aa2.31□□□□□ -2.04
RNVU1-19-201ENST00000613023 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
RNVU1-19-201ENST00000613023 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
RNVU1-19-201ENST00000613023 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
RNVU1-19-201ENST00000613023 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
RNVU1-19-201ENST00000613023 MT3P25713 68 aa2.22□□□□□ -2.05
RNVU1-19-201ENST00000613023 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
RNVU1-19-201ENST00000613023 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
RNVU1-19-201ENST00000613023 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
RNVU1-19-201ENST00000613023 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
RNVU1-19-201ENST00000613023 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
RNVU1-19-201ENST00000613023 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
RNVU1-19-201ENST00000613023 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
RNVU1-19-201ENST00000613023 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
RNVU1-19-201ENST00000613023 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
RNVU1-19-201ENST00000613023 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
RNVU1-19-201ENST00000613023 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
RNVU1-19-201ENST00000613023 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
RNVU1-19-201ENST00000613023 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
RNVU1-19-201ENST00000613023 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
RNVU1-19-201ENST00000613023 PRM1P04553 51 aa1.85□□□□□ -2.11
RNVU1-19-201ENST00000613023 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
RNVU1-19-201ENST00000613023 KRTAP9-9Q9BYP9 154 aa1.8□□□□□ -2.12
RNVU1-19-201ENST00000613023 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
RNVU1-19-201ENST00000613023 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
RNVU1-19-201ENST00000613023 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
RNVU1-19-201ENST00000613023 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
RNVU1-19-201ENST00000613023 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
RNVU1-19-201ENST00000613023 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
RNVU1-19-201ENST00000613023 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
RNVU1-19-201ENST00000613023 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
RNVU1-19-201ENST00000613023 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
RNVU1-19-201ENST00000613023 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
RNVU1-19-201ENST00000613023 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
RNVU1-19-201ENST00000613023 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
RNVU1-19-201ENST00000613023 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 94.6 ms