RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 TNP1P09430 55 aa2.84□□□□□ -1.95
PSMC6-219ENST00000612399 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
PSMC6-219ENST00000612399 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
PSMC6-219ENST00000612399 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
PSMC6-219ENST00000612399 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
PSMC6-219ENST00000612399 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
PSMC6-219ENST00000612399 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
PSMC6-219ENST00000612399 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
PSMC6-219ENST00000612399 INE1O15225 51 aa2.66□□□□□ -1.98
PSMC6-219ENST00000612399 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
PSMC6-219ENST00000612399 MT1HP80294 61 aa2.65□□□□□ -1.99
PSMC6-219ENST00000612399 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
PSMC6-219ENST00000612399 CRCT1Q9UGL9 99 aa2.63□□□□□ -1.99
PSMC6-219ENST00000612399 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
PSMC6-219ENST00000612399 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
PSMC6-219ENST00000612399 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
PSMC6-219ENST00000612399 M0R2T5 61 aa2.58□□□□□ -2
PSMC6-219ENST00000612399 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
PSMC6-219ENST00000612399 KRTAP19-8Q3LI54 63 aa2.54□□□□□ -2
PSMC6-219ENST00000612399 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
PSMC6-219ENST00000612399 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
PSMC6-219ENST00000612399 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
PSMC6-219ENST00000612399 MT2AP02795 61 aa2.49□□□□□ -2.01
PSMC6-219ENST00000612399 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
PSMC6-219ENST00000612399 MT1FP04733 61 aa2.47□□□□□ -2.01
PSMC6-219ENST00000612399 USH2AO75445 5202 aa2.45□□□□□ -2.02
PSMC6-219ENST00000612399 MT1XP80297 61 aa2.45□□□□□ -2.02
PSMC6-219ENST00000612399 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
PSMC6-219ENST00000612399 MT1BP07438 61 aa2.44□□□□□ -2.02
PSMC6-219ENST00000612399 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
PSMC6-219ENST00000612399 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
PSMC6-219ENST00000612399 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
PSMC6-219ENST00000612399 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
PSMC6-219ENST00000612399 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
PSMC6-219ENST00000612399 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
PSMC6-219ENST00000612399 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
PSMC6-219ENST00000612399 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
PSMC6-219ENST00000612399 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
PSMC6-219ENST00000612399 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
PSMC6-219ENST00000612399 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
PSMC6-219ENST00000612399 NEBP20929 6669 aa2.16□□□□□ -2.06
PSMC6-219ENST00000612399 MT1LQ93083 61 aa2.15□□□□□ -2.06
PSMC6-219ENST00000612399 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
PSMC6-219ENST00000612399 MT1EP04732 61 aa2.13□□□□□ -2.07
PSMC6-219ENST00000612399 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
PSMC6-219ENST00000612399 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
PSMC6-219ENST00000612399 KMT2DO14686 5537 aa2.12□□□□□ -2.07
PSMC6-219ENST00000612399 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
PSMC6-219ENST00000612399 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
PSMC6-219ENST00000612399 SPRR2EP22531 72 aa2.04□□□□□ -2.08
PSMC6-219ENST00000612399 SPRR2BP35325 72 aa2.04□□□□□ -2.08
PSMC6-219ENST00000612399 SPRR2AP35326 72 aa2.04□□□□□ -2.08
PSMC6-219ENST00000612399 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
PSMC6-219ENST00000612399 MT1GP13640 62 aa2.02□□□□□ -2.09
PSMC6-219ENST00000612399 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
PSMC6-219ENST00000612399 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
PSMC6-219ENST00000612399 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
PSMC6-219ENST00000612399 MT1MQ8N339 61 aa1.98□□□□□ -2.09
PSMC6-219ENST00000612399 SPRR2DP22532 72 aa1.98□□□□□ -2.09
PSMC6-219ENST00000612399 MT1AP04731 61 aa1.95□□□□□ -2.1
PSMC6-219ENST00000612399 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
PSMC6-219ENST00000612399 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
PSMC6-219ENST00000612399 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
PSMC6-219ENST00000612399 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
PSMC6-219ENST00000612399 PRM1P04553 51 aa1.77□□□□□ -2.13
PSMC6-219ENST00000612399 MT4P47944 62 aa1.74□□□□□ -2.13
PSMC6-219ENST00000612399 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
PSMC6-219ENST00000612399 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
PSMC6-219ENST00000612399 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
PSMC6-219ENST00000612399 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PSMC6-219ENST00000612399 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
PSMC6-219ENST00000612399 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
PSMC6-219ENST00000612399 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
PSMC6-219ENST00000612399 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
PSMC6-219ENST00000612399 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
PSMC6-219ENST00000612399 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
PSMC6-219ENST00000612399 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 107.1 ms