RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
VCX3A-203ENST00000612369 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
VCX3A-203ENST00000612369 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
VCX3A-203ENST00000612369 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
VCX3A-203ENST00000612369 MT4P47944 62 aa6.21□□□□□ -1.42
VCX3A-203ENST00000612369 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.42
VCX3A-203ENST00000612369 KRTAP5-4Q6L8H1 288 aa6.2□□□□□ -1.42
VCX3A-203ENST00000612369 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
VCX3A-203ENST00000612369 K7ERS5 55 aa6.16□□□□□ -1.42
VCX3A-203ENST00000612369 V9GYY9 64 aa6.15□□□□□ -1.42
VCX3A-203ENST00000612369 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
VCX3A-203ENST00000612369 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
VCX3A-203ENST00000612369 Q1T7F1 81 aa6.07□□□□□ -1.44
VCX3A-203ENST00000612369 PSPHP1O15172 72 aa6.06□□□□□ -1.44
VCX3A-203ENST00000612369 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
VCX3A-203ENST00000612369 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
VCX3A-203ENST00000612369 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
VCX3A-203ENST00000612369 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
VCX3A-203ENST00000612369 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
VCX3A-203ENST00000612369 A6NED7 52 aa5.87□□□□□ -1.47
VCX3A-203ENST00000612369 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
VCX3A-203ENST00000612369 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
VCX3A-203ENST00000612369 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
VCX3A-203ENST00000612369 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
VCX3A-203ENST00000612369 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
VCX3A-203ENST00000612369 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
VCX3A-203ENST00000612369 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
VCX3A-203ENST00000612369 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
VCX3A-203ENST00000612369 PCP4P48539 62 aa5.75□□□□□ -1.49
VCX3A-203ENST00000612369 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
VCX3A-203ENST00000612369 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
VCX3A-203ENST00000612369 ROMO1P60602 79 aa5.7□□□□□ -1.5
VCX3A-203ENST00000612369 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
VCX3A-203ENST00000612369 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
VCX3A-203ENST00000612369 MT1AP04731 61 aa5.53□□□□□ -1.52
VCX3A-203ENST00000612369 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
VCX3A-203ENST00000612369 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
VCX3A-203ENST00000612369 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
VCX3A-203ENST00000612369 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
VCX3A-203ENST00000612369 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
VCX3A-203ENST00000612369 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
VCX3A-203ENST00000612369 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
VCX3A-203ENST00000612369 MT3P25713 68 aa5.08□□□□□ -1.6
VCX3A-203ENST00000612369 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
VCX3A-203ENST00000612369 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
VCX3A-203ENST00000612369 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
VCX3A-203ENST00000612369 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
VCX3A-203ENST00000612369 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
VCX3A-203ENST00000612369 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
VCX3A-203ENST00000612369 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
VCX3A-203ENST00000612369 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
VCX3A-203ENST00000612369 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
VCX3A-203ENST00000612369 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
VCX3A-203ENST00000612369 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
VCX3A-203ENST00000612369 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
VCX3A-203ENST00000612369 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
VCX3A-203ENST00000612369 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
VCX3A-203ENST00000612369 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
VCX3A-203ENST00000612369 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
VCX3A-203ENST00000612369 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
VCX3A-203ENST00000612369 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
VCX3A-203ENST00000612369 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
VCX3A-203ENST00000612369 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
VCX3A-203ENST00000612369 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
VCX3A-203ENST00000612369 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
VCX3A-203ENST00000612369 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
VCX3A-203ENST00000612369 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
VCX3A-203ENST00000612369 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
VCX3A-203ENST00000612369 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
VCX3A-203ENST00000612369 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
VCX3A-203ENST00000612369 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
VCX3A-203ENST00000612369 PRM1P04553 51 aa2.89□□□□□ -1.95
VCX3A-203ENST00000612369 H3BS24 57 aa2.72□□□□□ -1.97
VCX3A-203ENST00000612369 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
VCX3A-203ENST00000612369 INE1O15225 51 aa2.63□□□□□ -1.99
VCX3A-203ENST00000612369 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
VCX3A-203ENST00000612369 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 215.2 ms