RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
PBX1-221ENST00000612123 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
PBX1-221ENST00000612123 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
PBX1-221ENST00000612123 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
PBX1-221ENST00000612123 SPRR2DP22532 72 aa2.47□□□□□ -2.01
PBX1-221ENST00000612123 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
PBX1-221ENST00000612123 MT1BP07438 61 aa2.45□□□□□ -2.02
PBX1-221ENST00000612123 MT1XP80297 61 aa2.44□□□□□ -2.02
PBX1-221ENST00000612123 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
PBX1-221ENST00000612123 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
PBX1-221ENST00000612123 MT1GP13640 62 aa2.39□□□□□ -2.03
PBX1-221ENST00000612123 SYNE2Q8WXH0 6885 aaKnown RBP2.39□□□□□ -2.03
PBX1-221ENST00000612123 LCE2BO14633 110 aa2.37□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP4-9Q9BYQ8 210 aa2.36□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP4-8A0A0G2JLE6 195 aa2.35□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP4-8Q9BYQ9 185 aa2.35□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
PBX1-221ENST00000612123 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.04
PBX1-221ENST00000612123 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
PBX1-221ENST00000612123 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
PBX1-221ENST00000612123 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
PBX1-221ENST00000612123 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
PBX1-221ENST00000612123 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
PBX1-221ENST00000612123 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
PBX1-221ENST00000612123 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
PBX1-221ENST00000612123 KRTAP19-3Q7Z4W3 81 aa2.27□□□□□ -2.05
PBX1-221ENST00000612123 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
PBX1-221ENST00000612123 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
PBX1-221ENST00000612123 MT4P47944 62 aa2.25□□□□□ -2.05
PBX1-221ENST00000612123 MT1LQ93083 61 aa2.25□□□□□ -2.05
PBX1-221ENST00000612123 MT1EP04732 61 aa2.22□□□□□ -2.05
PBX1-221ENST00000612123 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.06
PBX1-221ENST00000612123 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
PBX1-221ENST00000612123 LCE1AQ5T7P2 110 aa2.2□□□□□ -2.06
PBX1-221ENST00000612123 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
PBX1-221ENST00000612123 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
PBX1-221ENST00000612123 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
PBX1-221ENST00000612123 NEBP20929 6669 aa2.16□□□□□ -2.06
PBX1-221ENST00000612123 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
PBX1-221ENST00000612123 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
PBX1-221ENST00000612123 MT1MQ8N339 61 aa2.14□□□□□ -2.07
PBX1-221ENST00000612123 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
PBX1-221ENST00000612123 PRM1P04553 51 aa2.12□□□□□ -2.07
PBX1-221ENST00000612123 LCE1DQ5T752 114 aa2.11□□□□□ -2.07
PBX1-221ENST00000612123 MT3P25713 68 aa2.1□□□□□ -2.07
PBX1-221ENST00000612123 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
PBX1-221ENST00000612123 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
PBX1-221ENST00000612123 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
PBX1-221ENST00000612123 MT1AP04731 61 aa2.02□□□□□ -2.09
PBX1-221ENST00000612123 LCE5AQ5TCM9 118 aa2□□□□□ -2.09
PBX1-221ENST00000612123 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
PBX1-221ENST00000612123 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
PBX1-221ENST00000612123 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
PBX1-221ENST00000612123 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
PBX1-221ENST00000612123 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
PBX1-221ENST00000612123 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
PBX1-221ENST00000612123 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
PBX1-221ENST00000612123 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
PBX1-221ENST00000612123 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
PBX1-221ENST00000612123 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
PBX1-221ENST00000612123 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
PBX1-221ENST00000612123 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
PBX1-221ENST00000612123 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
PBX1-221ENST00000612123 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
PBX1-221ENST00000612123 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
PBX1-221ENST00000612123 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PBX1-221ENST00000612123 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
PBX1-221ENST00000612123 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
PBX1-221ENST00000612123 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
PBX1-221ENST00000612123 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
PBX1-221ENST00000612123 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
PBX1-221ENST00000612123 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
PBX1-221ENST00000612123 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
PBX1-221ENST00000612123 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
PBX1-221ENST00000612123 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 297 ms