RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	KRTAP2-1	Q9BYU5	128 aa		3.95	□□□□□ -1.78
EP400-208	ENST00000611841	MT1L	Q93083	61 aa		3.92	□□□□□ -1.78
EP400-208	ENST00000611841	MT1E	P04732	61 aa		3.92	□□□□□ -1.78
EP400-208	ENST00000611841	KRTAP9-9	Q9BYP9	154 aa		3.92	□□□□□ -1.78
EP400-208	ENST00000611841	LCE1F	Q5T754	118 aa		3.89	□□□□□ -1.79
EP400-208	ENST00000611841	DST	Q03001	7570 aa	Known RBP	3.88	□□□□□ -1.79
EP400-208	ENST00000611841	MUC12	Q9UKN1	5478 aa		3.87	□□□□□ -1.79
EP400-208	ENST00000611841	KRTAP9-6	A0A140TA67	174 aa		3.86	□□□□□ -1.79
EP400-208	ENST00000611841	KRTAP9-7	A8MTY7	169 aa		3.86	□□□□□ -1.79
EP400-208	ENST00000611841	CRCT1	Q9UGL9	99 aa		3.86	□□□□□ -1.79
EP400-208	ENST00000611841	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.84	□□□□□ -1.79
EP400-208	ENST00000611841	KRTAP4-3	Q9BYR4	195 aa		3.84	□□□□□ -1.8
EP400-208	ENST00000611841	KRTAP19-6	Q3LI70	58 aa		3.82	□□□□□ -1.8
EP400-208	ENST00000611841	LOC100996750	A0A140TA64	210 aa		3.81	□□□□□ -1.8
EP400-208	ENST00000611841	MT1G	P13640	62 aa		3.78	□□□□□ -1.8
EP400-208	ENST00000611841	KRTAP12-4	P60329	112 aa		3.77	□□□□□ -1.81
EP400-208	ENST00000611841	KRTAP9-2	Q9BYQ4	174 aa		3.76	□□□□□ -1.81
EP400-208	ENST00000611841	KRTAP19-4	Q3LI73	84 aa		3.75	□□□□□ -1.81
EP400-208	ENST00000611841	KRTAP19-3	Q7Z4W3	81 aa		3.68	□□□□□ -1.82
EP400-208	ENST00000611841	SPRR2F	Q96RM1	72 aa		3.68	□□□□□ -1.82
EP400-208	ENST00000611841	SYNE1	Q8NF91	8797 aa	Known RBP	3.68	□□□□□ -1.82
EP400-208	ENST00000611841	MT1M	Q8N339	61 aa		3.68	□□□□□ -1.82
EP400-208	ENST00000611841	MACF1	Q9UPN3	7388 aa	Known RBP	3.64	□□□□□ -1.83
EP400-208	ENST00000611841	LCE1E	Q5T753	118 aa		3.61	□□□□□ -1.83
EP400-208	ENST00000611841	SYNE2	Q8WXH0	6885 aa	Known RBP	3.59	□□□□□ -1.83
EP400-208	ENST00000611841	LCE3E	Q5T5B0	92 aa		3.58	□□□□□ -1.84
EP400-208	ENST00000611841	KRTAP2-2	Q9BYT5	123 aa		3.56	□□□□□ -1.84
EP400-208	ENST00000611841	OBSCN	Q5VST9	7968 aa		3.53	□□□□□ -1.84
EP400-208	ENST00000611841	LCE3B	Q5TA77	95 aa		3.52	□□□□□ -1.85
EP400-208	ENST00000611841	KRTAP4-6	Q9BYQ5	205 aa		3.5	□□□□□ -1.85
EP400-208	ENST00000611841	KRTAP4-9	Q9BYQ8	210 aa		3.49	□□□□□ -1.85
EP400-208	ENST00000611841	MDN1	Q9NU22	5596 aa		3.49	□□□□□ -1.85
EP400-208	ENST00000611841	LCE1A	Q5T7P2	110 aa		3.41	□□□□□ -1.86
EP400-208	ENST00000611841	PRM1	P04553	51 aa		3.4	□□□□□ -1.87
EP400-208	ENST00000611841	KRTAP6-1	Q3LI64	71 aa		3.37	□□□□□ -1.87
EP400-208	ENST00000611841	LCE1D	Q5T752	114 aa		3.37	□□□□□ -1.87
EP400-208	ENST00000611841	SPRR2E	P22531	72 aa		3.33	□□□□□ -1.88
EP400-208	ENST00000611841	SPRR2B	P35325	72 aa		3.33	□□□□□ -1.88
EP400-208	ENST00000611841	SPRR2A	P35326	72 aa		3.33	□□□□□ -1.88
EP400-208	ENST00000611841	LCE3D	Q9BYE3	92 aa		3.31	□□□□□ -1.88
EP400-208	ENST00000611841	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.29	□□□□□ -1.88
EP400-208	ENST00000611841	MT1A	P04731	61 aa		3.27	□□□□□ -1.89
EP400-208	ENST00000611841	KRTAP6-3	Q3LI67	103 aa		3.26	□□□□□ -1.89
EP400-208	ENST00000611841	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.26	□□□□□ -1.89
EP400-208	ENST00000611841	KRTAP5-9	P26371	169 aa		3.2	□□□□□ -1.9
EP400-208	ENST00000611841	MUC19	Q7Z5P9	8384 aa		3.17	□□□□□ -1.9
EP400-208	ENST00000611841	SPRR2D	P22532	72 aa		3.17	□□□□□ -1.9
EP400-208	ENST00000611841	KRTAP6-2	Q3LI66	62 aa		3.11	□□□□□ -1.91
EP400-208	ENST00000611841	MT3	P25713	68 aa		2.99	□□□□□ -1.93
EP400-208	ENST00000611841	NEB	P20929	6669 aa		2.99	□□□□□ -1.93
EP400-208	ENST00000611841	KRTAP4-12	Q9BQ66	201 aa		2.98	□□□□□ -1.93
EP400-208	ENST00000611841	MT4	P47944	62 aa		2.88	□□□□□ -1.95
EP400-208	ENST00000611841	KRTAP20-1	Q3LI63	56 aa		2.79	□□□□□ -1.96
EP400-208	ENST00000611841	KRTAP4-2	Q9BYR5	136 aa		2.77	□□□□□ -1.97
EP400-208	ENST00000611841	KRTAP5-4	Q6L8H1	288 aa		2.74	□□□□□ -1.97
EP400-208	ENST00000611841	KRTAP20-2	Q3LI61	65 aa		2.68	□□□□□ -1.98
EP400-208	ENST00000611841	HMCN1	Q96RW7	5635 aa		2.66	□□□□□ -1.98
EP400-208	ENST00000611841	KRTAP4-11	Q9BYQ6	195 aa		2.64	□□□□□ -1.99
EP400-208	ENST00000611841	LCE1B	Q5T7P3	118 aa		2.57	□□□□□ -2
EP400-208	ENST00000611841	KRTAP5-3	Q6L8H2	238 aa		2.56	□□□□□ -2
EP400-208	ENST00000611841	KRTAP5-2	Q701N4	177 aa		2.55	□□□□□ -2
EP400-208	ENST00000611841	MUC5AC	P98088	5654 aa		2.53	□□□□□ -2.01
EP400-208	ENST00000611841	GPR98	Q8WXG9	6306 aa		2.38	□□□□□ -2.03
EP400-208	ENST00000611841	AHNAK2	Q8IVF2	5795 aa		2.31	□□□□□ -2.04
EP400-208	ENST00000611841	KRTAP5-10	Q6L8G5	202 aa		2.3	□□□□□ -2.04
EP400-208	ENST00000611841	LCE1C	Q5T751	118 aa		2.25	□□□□□ -2.05
EP400-208	ENST00000611841	KRTAP5-1	Q6L8H4	278 aa		2.22	□□□□□ -2.05
EP400-208	ENST00000611841	KRTAP4-4	Q9BYR3	166 aa		2.13	□□□□□ -2.07
EP400-208	ENST00000611841	KRTAP21-2	Q3LI59	83 aa		2.11	□□□□□ -2.07
EP400-208	ENST00000611841	KRTAP5-8	O75690	187 aa		2.09	□□□□□ -2.08
EP400-208	ENST00000611841	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.07	□□□□□ -2.08
EP400-208	ENST00000611841	KRTAP21-1	Q3LI58	79 aa		2.06	□□□□□ -2.08
EP400-208	ENST00000611841	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.02	□□□□□ -2.09
EP400-208	ENST00000611841	KRTAP5-7	Q6L8G8	165 aa		1.95	□□□□□ -2.1
EP400-208	ENST00000611841	KRTAP5-11	Q6L8G4	156 aa		1.89	□□□□□ -2.11
EP400-208	ENST00000611841	AHNAK	Q09666	5890 aa	Known RBP	1.79	□□□□□ -2.12
EP400-208	ENST00000611841	PHGR1	C9JFL3	82 aa		1.66	□□□□□ -2.14
EP400-208	ENST00000611841	MUC16	Q8WXI7	14507 aa		1.07	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 27.7 ms