RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
NEK3-206ENST00000611833 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
NEK3-206ENST00000611833 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
NEK3-206ENST00000611833 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
NEK3-206ENST00000611833 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
NEK3-206ENST00000611833 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
NEK3-206ENST00000611833 MT1MQ8N339 61 aa5.62□□□□□ -1.51
NEK3-206ENST00000611833 MT1GP13640 62 aa5.61□□□□□ -1.51
NEK3-206ENST00000611833 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
NEK3-206ENST00000611833 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
NEK3-206ENST00000611833 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
NEK3-206ENST00000611833 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
NEK3-206ENST00000611833 DSTQ03001 7570 aaKnown RBP5.43□□□□□ -1.54
NEK3-206ENST00000611833 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
NEK3-206ENST00000611833 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
NEK3-206ENST00000611833 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
NEK3-206ENST00000611833 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
NEK3-206ENST00000611833 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
NEK3-206ENST00000611833 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
NEK3-206ENST00000611833 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.58
NEK3-206ENST00000611833 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
NEK3-206ENST00000611833 MT1AP04731 61 aa5.03□□□□□ -1.6
NEK3-206ENST00000611833 SPRR2EP22531 72 aa5.02□□□□□ -1.61
NEK3-206ENST00000611833 SPRR2BP35325 72 aa5.02□□□□□ -1.61
NEK3-206ENST00000611833 SPRR2AP35326 72 aa5.02□□□□□ -1.61
NEK3-206ENST00000611833 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
NEK3-206ENST00000611833 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
NEK3-206ENST00000611833 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
NEK3-206ENST00000611833 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
NEK3-206ENST00000611833 SPRR2DP22532 72 aa4.81□□□□□ -1.64
NEK3-206ENST00000611833 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
NEK3-206ENST00000611833 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
NEK3-206ENST00000611833 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
NEK3-206ENST00000611833 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
NEK3-206ENST00000611833 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
NEK3-206ENST00000611833 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
NEK3-206ENST00000611833 PRM1P04553 51 aa4.55□□□□□ -1.68
NEK3-206ENST00000611833 MT3P25713 68 aa4.55□□□□□ -1.68
NEK3-206ENST00000611833 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
NEK3-206ENST00000611833 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
NEK3-206ENST00000611833 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
NEK3-206ENST00000611833 NEBP20929 6669 aa4.41□□□□□ -1.7
NEK3-206ENST00000611833 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
NEK3-206ENST00000611833 MT4P47944 62 aa4.24□□□□□ -1.73
NEK3-206ENST00000611833 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
NEK3-206ENST00000611833 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
NEK3-206ENST00000611833 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
NEK3-206ENST00000611833 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
NEK3-206ENST00000611833 LCE1DQ5T752 114 aa4.03□□□□□ -1.77
NEK3-206ENST00000611833 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
NEK3-206ENST00000611833 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
NEK3-206ENST00000611833 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
NEK3-206ENST00000611833 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
NEK3-206ENST00000611833 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
NEK3-206ENST00000611833 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
NEK3-206ENST00000611833 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
NEK3-206ENST00000611833 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
NEK3-206ENST00000611833 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
NEK3-206ENST00000611833 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
NEK3-206ENST00000611833 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
NEK3-206ENST00000611833 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
NEK3-206ENST00000611833 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
NEK3-206ENST00000611833 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
NEK3-206ENST00000611833 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
NEK3-206ENST00000611833 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
NEK3-206ENST00000611833 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
NEK3-206ENST00000611833 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
NEK3-206ENST00000611833 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
NEK3-206ENST00000611833 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
NEK3-206ENST00000611833 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
NEK3-206ENST00000611833 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
NEK3-206ENST00000611833 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
NEK3-206ENST00000611833 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
NEK3-206ENST00000611833 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
NEK3-206ENST00000611833 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
NEK3-206ENST00000611833 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
NEK3-206ENST00000611833 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 194.2 ms