RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 DSTQ03001 7570 aaKnown RBP9.32□□□□□ -0.92
VEGFA-226ENST00000611736 MT1LQ93083 61 aa9.28□□□□□ -0.92
VEGFA-226ENST00000611736 A6NED7 52 aa9.27□□□□□ -0.93
VEGFA-226ENST00000611736 PP632Q6XCG6 107 aa9.24□□□□□ -0.93
VEGFA-226ENST00000611736 RPS28P62857 69 aaKnown RBP9.23□□□□□ -0.93
VEGFA-226ENST00000611736 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
VEGFA-226ENST00000611736 MT1MQ8N339 61 aa9.19□□□□□ -0.94
VEGFA-226ENST00000611736 KRTAP12-3P60328 96 aa9.14□□□□□ -0.95
VEGFA-226ENST00000611736 KRTAP4-3Q9BYR4 195 aa9□□□□□ -0.97
VEGFA-226ENST00000611736 KRTAP4-9Q9BYQ8 210 aa8.95□□□□□ -0.98
VEGFA-226ENST00000611736 CDC42SE1Q9NRR8 79 aa8.9□□□□□ -0.98
VEGFA-226ENST00000611736 KRTAP4-7Q9BYR0 210 aa8.87□□□□□ -0.99
VEGFA-226ENST00000611736 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
VEGFA-226ENST00000611736 KRTAP23-1A1A580 65 aa8.82□□□□□ -1
VEGFA-226ENST00000611736 ROMO1P60602 79 aa8.78□□□□□ -1
VEGFA-226ENST00000611736 LCE4AQ5TA78 99 aa8.76□□□□□ -1.01
VEGFA-226ENST00000611736 LCE1DQ5T752 114 aa8.75□□□□□ -1.01
VEGFA-226ENST00000611736 GPR98Q8WXG9 6306 aa8.66□□□□□ -1.02
VEGFA-226ENST00000611736 MT4P47944 62 aa8.65□□□□□ -1.02
VEGFA-226ENST00000611736 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
VEGFA-226ENST00000611736 HMCN1Q96RW7 5635 aa8.59□□□□□ -1.03
VEGFA-226ENST00000611736 KRTAP5-4Q6L8H1 288 aa8.58□□□□□ -1.04
VEGFA-226ENST00000611736 KRTAP19-4Q3LI73 84 aa8.55□□□□□ -1.04
VEGFA-226ENST00000611736 LCE3CQ5T5A8 94 aa8.43□□□□□ -1.06
VEGFA-226ENST00000611736 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
VEGFA-226ENST00000611736 KRTAP4-6Q9BYQ5 205 aa8.39□□□□□ -1.07
VEGFA-226ENST00000611736 KRTAP5-5Q701N2 237 aaPredicted RBP8.38□□□□□ -1.07
VEGFA-226ENST00000611736 AHNAK2Q8IVF2 5795 aa8.24□□□□□ -1.09
VEGFA-226ENST00000611736 BRK1Q8WUW1 75 aa8.21□□□□□ -1.1
VEGFA-226ENST00000611736 KRTAP5-10Q6L8G5 202 aa8.15□□□□□ -1.1
VEGFA-226ENST00000611736 KRTAP12-4P60329 112 aa8.12□□□□□ -1.11
VEGFA-226ENST00000611736 KRTAP20-2Q3LI61 65 aa8.11□□□□□ -1.11
VEGFA-226ENST00000611736 SYNE1Q8NF91 8797 aaKnown RBP8.09□□□□□ -1.11
VEGFA-226ENST00000611736 SPRR5A0A1B0GTR4 108 aa8.06□□□□□ -1.12
VEGFA-226ENST00000611736 KRTAP9-6A8MVA2 160 aa7.96□□□□□ -1.14
VEGFA-226ENST00000611736 KRTAP5-3Q6L8H2 238 aa7.96□□□□□ -1.14
VEGFA-226ENST00000611736 MT1AP04731 61 aa7.89□□□□□ -1.15
VEGFA-226ENST00000611736 KRTAP6-1Q3LI64 71 aa7.86□□□□□ -1.15
VEGFA-226ENST00000611736 KRTAP5-7Q6L8G8 165 aa7.86□□□□□ -1.15
VEGFA-226ENST00000611736 PMAIP1Q13794 54 aa7.71□□□□□ -1.18
VEGFA-226ENST00000611736 KRTAP9-4Q9BYQ2 154 aa7.6□□□□□ -1.19
VEGFA-226ENST00000611736 KRTAP5-2Q701N4 177 aa7.57□□□□□ -1.2
VEGFA-226ENST00000611736 KRTAP6-2Q3LI66 62 aa7.46□□□□□ -1.22
VEGFA-226ENST00000611736 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
VEGFA-226ENST00000611736 KRTAP4-11Q9BYQ6 195 aa7.4□□□□□ -1.22
VEGFA-226ENST00000611736 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
VEGFA-226ENST00000611736 MT3P25713 68 aa7.21□□□□□ -1.26
VEGFA-226ENST00000611736 KRTAP5-8O75690 187 aa7.14□□□□□ -1.27
VEGFA-226ENST00000611736 OBSCNQ5VST9 7968 aa7.08□□□□□ -1.28
VEGFA-226ENST00000611736 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
VEGFA-226ENST00000611736 KRTAP9-9Q9BYP9 154 aa6.82□□□□□ -1.32
VEGFA-226ENST00000611736 MUC5BQ9HC84 5762 aaPredicted RBP6.78□□□□□ -1.32
VEGFA-226ENST00000611736 MUC5ACP98088 5654 aa6.75□□□□□ -1.33
VEGFA-226ENST00000611736 AHNAKQ09666 5890 aaKnown RBP6.74□□□□□ -1.33
VEGFA-226ENST00000611736 KRTAP5-1Q6L8H4 278 aa6.74□□□□□ -1.33
VEGFA-226ENST00000611736 LCE1EQ5T753 118 aa6.52□□□□□ -1.37
VEGFA-226ENST00000611736 LUZP6Q538Z0 58 aa6.2□□□□□ -1.42
VEGFA-226ENST00000611736 LCE1BQ5T7P3 118 aa6.2□□□□□ -1.42
VEGFA-226ENST00000611736 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
VEGFA-226ENST00000611736 H3BS24 57 aa6.15□□□□□ -1.42
VEGFA-226ENST00000611736 LCE3DQ9BYE3 92 aa6.13□□□□□ -1.43
VEGFA-226ENST00000611736 LCE1CQ5T751 118 aa6.06□□□□□ -1.44
VEGFA-226ENST00000611736 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
VEGFA-226ENST00000611736 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
VEGFA-226ENST00000611736 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
VEGFA-226ENST00000611736 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.54□□□□□ -1.52
VEGFA-226ENST00000611736 KRTAP5-11Q6L8G4 156 aa5.48□□□□□ -1.53
VEGFA-226ENST00000611736 LCE1FQ5T754 118 aa5.3□□□□□ -1.56
VEGFA-226ENST00000611736 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
VEGFA-226ENST00000611736 KRTAP21-2Q3LI59 83 aa5.15□□□□□ -1.59
VEGFA-226ENST00000611736 PHGR1C9JFL3 82 aa4.77□□□□□ -1.65
VEGFA-226ENST00000611736 KRTAP4-4Q9BYR3 166 aa4.74□□□□□ -1.65
VEGFA-226ENST00000611736 PRM1P04553 51 aa4.53□□□□□ -1.68
VEGFA-226ENST00000611736 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
VEGFA-226ENST00000611736 INE1O15225 51 aa4.33□□□□□ -1.72
VEGFA-226ENST00000611736 KRTAP21-1Q3LI58 79 aa3.63□□□□□ -1.83
VEGFA-226ENST00000611736 MUC16Q8WXI7 14507 aa3.12□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms