RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
CDK11B-205ENST00000611150 MACF1Q9UPN3 7388 aaKnown RBP5.74□□□□□ -1.49
CDK11B-205ENST00000611150 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
CDK11B-205ENST00000611150 MT1BP07438 61 aa5.67□□□□□ -1.5
CDK11B-205ENST00000611150 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
CDK11B-205ENST00000611150 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
CDK11B-205ENST00000611150 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
CDK11B-205ENST00000611150 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
CDK11B-205ENST00000611150 PRM1P04553 51 aa5.36□□□□□ -1.55
CDK11B-205ENST00000611150 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
CDK11B-205ENST00000611150 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
CDK11B-205ENST00000611150 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
CDK11B-205ENST00000611150 NEBP20929 6669 aa5.28□□□□□ -1.56
CDK11B-205ENST00000611150 KMT2DO14686 5537 aa5.24□□□□□ -1.57
CDK11B-205ENST00000611150 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
CDK11B-205ENST00000611150 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
CDK11B-205ENST00000611150 MT1LQ93083 61 aa5.18□□□□□ -1.58
CDK11B-205ENST00000611150 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
CDK11B-205ENST00000611150 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.58
CDK11B-205ENST00000611150 LCE1DQ5T752 114 aa5.15□□□□□ -1.58
CDK11B-205ENST00000611150 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.58
CDK11B-205ENST00000611150 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
CDK11B-205ENST00000611150 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
CDK11B-205ENST00000611150 MT1EP04732 61 aa5.11□□□□□ -1.59
CDK11B-205ENST00000611150 SPRR2EP22531 72 aa5.09□□□□□ -1.59
CDK11B-205ENST00000611150 SPRR2BP35325 72 aa5.09□□□□□ -1.59
CDK11B-205ENST00000611150 SPRR2AP35326 72 aa5.09□□□□□ -1.59
CDK11B-205ENST00000611150 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
CDK11B-205ENST00000611150 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
CDK11B-205ENST00000611150 MT1AP04731 61 aa5.05□□□□□ -1.6
CDK11B-205ENST00000611150 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
CDK11B-205ENST00000611150 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
CDK11B-205ENST00000611150 MT1GP13640 62 aa4.96□□□□□ -1.62
CDK11B-205ENST00000611150 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
CDK11B-205ENST00000611150 SPRR2DP22532 72 aa4.92□□□□□ -1.62
CDK11B-205ENST00000611150 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
CDK11B-205ENST00000611150 LCE1FQ5T754 118 aa4.83□□□□□ -1.64
CDK11B-205ENST00000611150 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
CDK11B-205ENST00000611150 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
CDK11B-205ENST00000611150 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
CDK11B-205ENST00000611150 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
CDK11B-205ENST00000611150 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
CDK11B-205ENST00000611150 MT1MQ8N339 61 aa4.57□□□□□ -1.68
CDK11B-205ENST00000611150 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
CDK11B-205ENST00000611150 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
CDK11B-205ENST00000611150 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
CDK11B-205ENST00000611150 MT4P47944 62 aa4.29□□□□□ -1.72
CDK11B-205ENST00000611150 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
CDK11B-205ENST00000611150 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
CDK11B-205ENST00000611150 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
CDK11B-205ENST00000611150 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
CDK11B-205ENST00000611150 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
CDK11B-205ENST00000611150 MT3P25713 68 aa4.05□□□□□ -1.76
CDK11B-205ENST00000611150 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
CDK11B-205ENST00000611150 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
CDK11B-205ENST00000611150 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
CDK11B-205ENST00000611150 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
CDK11B-205ENST00000611150 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.78
CDK11B-205ENST00000611150 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
CDK11B-205ENST00000611150 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
CDK11B-205ENST00000611150 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.81
CDK11B-205ENST00000611150 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
CDK11B-205ENST00000611150 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
CDK11B-205ENST00000611150 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
CDK11B-205ENST00000611150 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
CDK11B-205ENST00000611150 KRTAP21-1Q3LI58 79 aa3.52□□□□□ -1.85
CDK11B-205ENST00000611150 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
CDK11B-205ENST00000611150 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
CDK11B-205ENST00000611150 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CDK11B-205ENST00000611150 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
CDK11B-205ENST00000611150 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
CDK11B-205ENST00000611150 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
CDK11B-205ENST00000611150 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.97
CDK11B-205ENST00000611150 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
CDK11B-205ENST00000611150 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
CDK11B-205ENST00000611150 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
CDK11B-205ENST00000611150 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CDK11B-205ENST00000611150 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms