RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 KRTAP19-3Q7Z4W3 81 aa9.43□□□□□ -0.9
CSPG5-205ENST00000610462 MT1GP13640 62 aa9.39□□□□□ -0.91
CSPG5-205ENST00000610462 MT1MQ8N339 61 aa9.35□□□□□ -0.91
CSPG5-205ENST00000610462 SPRR2FQ96RM1 72 aa9.3□□□□□ -0.92
CSPG5-205ENST00000610462 MUC12Q9UKN1 5478 aa9.29□□□□□ -0.92
CSPG5-205ENST00000610462 KRTAP4-3Q9BYR4 195 aa9.27□□□□□ -0.93
CSPG5-205ENST00000610462 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.93
CSPG5-205ENST00000610462 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
CSPG5-205ENST00000610462 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
CSPG5-205ENST00000610462 KRTAP2-1Q9BYU5 128 aa9.2□□□□□ -0.94
CSPG5-205ENST00000610462 LCE5AQ5TCM9 118 aa9.18□□□□□ -0.94
CSPG5-205ENST00000610462 MACF1Q9UPN3 7388 aaKnown RBP9.17□□□□□ -0.94
CSPG5-205ENST00000610462 LOC100996750A0A140TA64 210 aa9.11□□□□□ -0.95
CSPG5-205ENST00000610462 KRTAP5-9P26371 169 aa8.93□□□□□ -0.98
CSPG5-205ENST00000610462 SYNE2Q8WXH0 6885 aaKnown RBP8.8□□□□□ -1
CSPG5-205ENST00000610462 LCE1AQ5T7P2 110 aa8.79□□□□□ -1
CSPG5-205ENST00000610462 KRTAP9-6A0A140TA67 174 aa8.76□□□□□ -1.01
CSPG5-205ENST00000610462 SPRR2EP22531 72 aa8.64□□□□□ -1.03
CSPG5-205ENST00000610462 SPRR2BP35325 72 aa8.64□□□□□ -1.03
CSPG5-205ENST00000610462 SPRR2AP35326 72 aa8.64□□□□□ -1.03
CSPG5-205ENST00000610462 DSTQ03001 7570 aaKnown RBP8.62□□□□□ -1.03
CSPG5-205ENST00000610462 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
CSPG5-205ENST00000610462 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
CSPG5-205ENST00000610462 KRTAP6-3Q3LI67 103 aa8.45□□□□□ -1.06
CSPG5-205ENST00000610462 MT1AP04731 61 aa8.35□□□□□ -1.07
CSPG5-205ENST00000610462 KRTAP5-5Q701N2 237 aaPredicted RBP8.34□□□□□ -1.07
CSPG5-205ENST00000610462 KRTAP6-1Q3LI64 71 aa8.34□□□□□ -1.07
CSPG5-205ENST00000610462 SPRR2DP22532 72 aa8.3□□□□□ -1.08
CSPG5-205ENST00000610462 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
CSPG5-205ENST00000610462 KRTAP9-7A8MTY7 169 aa8.03□□□□□ -1.12
CSPG5-205ENST00000610462 KRTAP12-4P60329 112 aa8.01□□□□□ -1.13
CSPG5-205ENST00000610462 KRTAP4-9Q9BYQ8 210 aa7.96□□□□□ -1.14
CSPG5-205ENST00000610462 SYNE1Q8NF91 8797 aaKnown RBP7.91□□□□□ -1.14
CSPG5-205ENST00000610462 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.15
CSPG5-205ENST00000610462 NEBP20929 6669 aa7.8□□□□□ -1.16
CSPG5-205ENST00000610462 LCE3DQ9BYE3 92 aa7.72□□□□□ -1.17
CSPG5-205ENST00000610462 KRTAP5-4Q6L8H1 288 aa7.63□□□□□ -1.19
CSPG5-205ENST00000610462 LCE3EQ5T5B0 92 aa7.58□□□□□ -1.2
CSPG5-205ENST00000610462 KRTAP6-2Q3LI66 62 aa7.55□□□□□ -1.2
CSPG5-205ENST00000610462 MT3P25713 68 aa7.53□□□□□ -1.2
CSPG5-205ENST00000610462 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
CSPG5-205ENST00000610462 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
CSPG5-205ENST00000610462 MT4P47944 62 aa7.23□□□□□ -1.25
CSPG5-205ENST00000610462 KRTAP2-2Q9BYT5 123 aa7.15□□□□□ -1.27
CSPG5-205ENST00000610462 KRTAP20-2Q3LI61 65 aa7.13□□□□□ -1.27
CSPG5-205ENST00000610462 KRTAP20-1Q3LI63 56 aa7.1□□□□□ -1.27
CSPG5-205ENST00000610462 PRM1P04553 51 aa7.08□□□□□ -1.28
CSPG5-205ENST00000610462 KRTAP5-2Q701N4 177 aa7.04□□□□□ -1.28
CSPG5-205ENST00000610462 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
CSPG5-205ENST00000610462 OBSCNQ5VST9 7968 aa6.9□□□□□ -1.31
CSPG5-205ENST00000610462 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
CSPG5-205ENST00000610462 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
CSPG5-205ENST00000610462 LCE1EQ5T753 118 aa6.34□□□□□ -1.39
CSPG5-205ENST00000610462 MUC5ACP98088 5654 aa6.16□□□□□ -1.42
CSPG5-205ENST00000610462 LCE1BQ5T7P3 118 aa6.06□□□□□ -1.44
CSPG5-205ENST00000610462 KRTAP5-1Q6L8H4 278 aa6.01□□□□□ -1.45
CSPG5-205ENST00000610462 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
CSPG5-205ENST00000610462 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
CSPG5-205ENST00000610462 KRTAP4-2Q9BYR5 136 aa5.95□□□□□ -1.46
CSPG5-205ENST00000610462 LCE1CQ5T751 118 aa5.94□□□□□ -1.46
CSPG5-205ENST00000610462 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
CSPG5-205ENST00000610462 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
CSPG5-205ENST00000610462 KRTAP5-7Q6L8G8 165 aa5.69□□□□□ -1.5
CSPG5-205ENST00000610462 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.61□□□□□ -1.51
CSPG5-205ENST00000610462 KRTAP21-2Q3LI59 83 aa5.43□□□□□ -1.54
CSPG5-205ENST00000610462 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
CSPG5-205ENST00000610462 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
CSPG5-205ENST00000610462 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
CSPG5-205ENST00000610462 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
CSPG5-205ENST00000610462 KRTAP4-4Q9BYR3 166 aa4.85□□□□□ -1.63
CSPG5-205ENST00000610462 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
CSPG5-205ENST00000610462 PHGR1C9JFL3 82 aa4.45□□□□□ -1.7
CSPG5-205ENST00000610462 KRTAP21-1Q3LI58 79 aa4.45□□□□□ -1.7
CSPG5-205ENST00000610462 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CSPG5-205ENST00000610462 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
CSPG5-205ENST00000610462 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
CSPG5-205ENST00000610462 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms