RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	INE1	O15225	51 aa		5.89	□□□□□ -1.47
RDH13-223	ENST00000610356	KRTAP4-7	Q9BYR0	210 aa		5.89	□□□□□ -1.47
RDH13-223	ENST00000610356	SPRR2F	Q96RM1	72 aa		5.86	□□□□□ -1.47
RDH13-223	ENST00000610356	KRTAP19-3	Q7Z4W3	81 aa		5.84	□□□□□ -1.47
RDH13-223	ENST00000610356	MT1G	P13640	62 aa		5.8	□□□□□ -1.48
RDH13-223	ENST00000610356	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.78	□□□□□ -1.48
RDH13-223	ENST00000610356	KRTAP9-6	A8MVA2	160 aa		5.77	□□□□□ -1.49
RDH13-223	ENST00000610356	MT1M	Q8N339	61 aa		5.76	□□□□□ -1.49
RDH13-223	ENST00000610356	MUC12	Q9UKN1	5478 aa		5.74	□□□□□ -1.49
RDH13-223	ENST00000610356	KRTAP5-9	P26371	169 aa		5.7	□□□□□ -1.5
RDH13-223	ENST00000610356	LCE5A	Q5TCM9	118 aa		5.7	□□□□□ -1.5
RDH13-223	ENST00000610356	SYNE2	Q8WXH0	6885 aa	Known RBP	5.7	□□□□□ -1.5
RDH13-223	ENST00000610356	KRTAP4-3	Q9BYR4	195 aa		5.67	□□□□□ -1.5
RDH13-223	ENST00000610356	KRTAP2-3	P0C7H8	128 aa		5.63	□□□□□ -1.51
RDH13-223	ENST00000610356	KRTAP2-4	Q9BYR9	128 aa		5.63	□□□□□ -1.51
RDH13-223	ENST00000610356	KRTAP2-1	Q9BYU5	128 aa		5.63	□□□□□ -1.51
RDH13-223	ENST00000610356	KRTAP9-7	A8MTY7	169 aa		5.6	□□□□□ -1.51
RDH13-223	ENST00000610356	LCE1A	Q5T7P2	110 aa		5.56	□□□□□ -1.52
RDH13-223	ENST00000610356	LOC100996750	A0A140TA64	210 aa		5.52	□□□□□ -1.53
RDH13-223	ENST00000610356	SPRR2E	P22531	72 aa		5.5	□□□□□ -1.53
RDH13-223	ENST00000610356	SPRR2B	P35325	72 aa		5.5	□□□□□ -1.53
RDH13-223	ENST00000610356	SPRR2A	P35326	72 aa		5.5	□□□□□ -1.53
RDH13-223	ENST00000610356	KRTAP6-3	Q3LI67	103 aa		5.5	□□□□□ -1.53
RDH13-223	ENST00000610356	MDN1	Q9NU22	5596 aa		5.42	□□□□□ -1.54
RDH13-223	ENST00000610356	DST	Q03001	7570 aa	Known RBP	5.36	□□□□□ -1.55
RDH13-223	ENST00000610356	SPRR2D	P22532	72 aa		5.3	□□□□□ -1.56
RDH13-223	ENST00000610356	NEB	P20929	6669 aa		5.26	□□□□□ -1.57
RDH13-223	ENST00000610356	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.15	□□□□□ -1.58
RDH13-223	ENST00000610356	MT1A	P04731	61 aa		5.12	□□□□□ -1.59
RDH13-223	ENST00000610356	KRTAP6-1	Q3LI64	71 aa		5.08	□□□□□ -1.6
RDH13-223	ENST00000610356	LCE3B	Q5TA77	95 aa		5.06	□□□□□ -1.6
RDH13-223	ENST00000610356	KRTAP20-1	Q3LI63	56 aa		4.89	□□□□□ -1.63
RDH13-223	ENST00000610356	KRTAP12-4	P60329	112 aa		4.88	□□□□□ -1.63
RDH13-223	ENST00000610356	SYNE1	Q8NF91	8797 aa	Known RBP	4.88	□□□□□ -1.63
RDH13-223	ENST00000610356	KRTAP9-4	Q9BYQ2	154 aa		4.84	□□□□□ -1.63
RDH13-223	ENST00000610356	KRTAP5-4	Q6L8H1	288 aa		4.81	□□□□□ -1.64
RDH13-223	ENST00000610356	KRTAP4-9	Q9BYQ8	210 aa		4.76	□□□□□ -1.65
RDH13-223	ENST00000610356	KRTAP2-2	Q9BYT5	123 aa		4.75	□□□□□ -1.65
RDH13-223	ENST00000610356	LCE4A	Q5TA78	99 aa		4.68	□□□□□ -1.66
RDH13-223	ENST00000610356	KRTAP6-2	Q3LI66	62 aa		4.65	□□□□□ -1.67
RDH13-223	ENST00000610356	MT3	P25713	68 aa		4.64	□□□□□ -1.67
RDH13-223	ENST00000610356	LCE3D	Q9BYE3	92 aa		4.62	□□□□□ -1.67
RDH13-223	ENST00000610356	MT4	P47944	62 aa		4.6	□□□□□ -1.67
RDH13-223	ENST00000610356	KRTAP4-6	Q9BYQ5	205 aa		4.58	□□□□□ -1.68
RDH13-223	ENST00000610356	LCE3E	Q5T5B0	92 aa		4.57	□□□□□ -1.68
RDH13-223	ENST00000610356	KRTAP20-2	Q3LI61	65 aa		4.5	□□□□□ -1.69
RDH13-223	ENST00000610356	LCE1D	Q5T752	114 aa		4.46	□□□□□ -1.69
RDH13-223	ENST00000610356	KRTAP5-2	Q701N4	177 aa		4.4	□□□□□ -1.71
RDH13-223	ENST00000610356	HMCN1	Q96RW7	5635 aa		4.37	□□□□□ -1.71
RDH13-223	ENST00000610356	KRTAP5-3	Q6L8H2	238 aa		4.32	□□□□□ -1.72
RDH13-223	ENST00000610356	PRM1	P04553	51 aa		4.29	□□□□□ -1.72
RDH13-223	ENST00000610356	OBSCN	Q5VST9	7968 aa		4.26	□□□□□ -1.73
RDH13-223	ENST00000610356	AHNAK2	Q8IVF2	5795 aa		4.02	□□□□□ -1.77
RDH13-223	ENST00000610356	GPR98	Q8WXG9	6306 aa		3.96	□□□□□ -1.78
RDH13-223	ENST00000610356	LCE1E	Q5T753	118 aa		3.95	□□□□□ -1.78
RDH13-223	ENST00000610356	KRTAP5-10	Q6L8G5	202 aa		3.9	□□□□□ -1.78
RDH13-223	ENST00000610356	KRTAP4-11	Q9BYQ6	195 aa		3.84	□□□□□ -1.79
RDH13-223	ENST00000610356	KRTAP5-1	Q6L8H4	278 aa		3.78	□□□□□ -1.81
RDH13-223	ENST00000610356	LCE1B	Q5T7P3	118 aa		3.76	□□□□□ -1.81
RDH13-223	ENST00000610356	MUC5AC	P98088	5654 aa		3.73	□□□□□ -1.81
RDH13-223	ENST00000610356	KRTAP5-8	O75690	187 aa		3.69	□□□□□ -1.82
RDH13-223	ENST00000610356	LCE1C	Q5T751	118 aa		3.69	□□□□□ -1.82
RDH13-223	ENST00000610356	KRTAP4-2	Q9BYR5	136 aa		3.69	□□□□□ -1.82
RDH13-223	ENST00000610356	KRTAP5-7	Q6L8G8	165 aa		3.67	□□□□□ -1.82
RDH13-223	ENST00000610356	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.46	□□□□□ -1.85
RDH13-223	ENST00000610356	KRTAP21-2	Q3LI59	83 aa		3.32	□□□□□ -1.88
RDH13-223	ENST00000610356	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.3	□□□□□ -1.88
RDH13-223	ENST00000610356	KRTAP9-9	Q9BYP9	154 aa		3.29	□□□□□ -1.88
RDH13-223	ENST00000610356	KRTAP5-11	Q6L8G4	156 aa		3.24	□□□□□ -1.89
RDH13-223	ENST00000610356	AHNAK	Q09666	5890 aa	Known RBP	3.17	□□□□□ -1.9
RDH13-223	ENST00000610356	KRTAP4-12	Q9BQ66	201 aa		3.02	□□□□□ -1.93
RDH13-223	ENST00000610356	KRTAP4-4	Q9BYR3	166 aa		2.95	□□□□□ -1.94
RDH13-223	ENST00000610356	LCE1F	Q5T754	118 aa		2.85	□□□□□ -1.95
RDH13-223	ENST00000610356	PHGR1	C9JFL3	82 aa		2.78	□□□□□ -1.97
RDH13-223	ENST00000610356	KRTAP21-1	Q3LI58	79 aa		2.76	□□□□□ -1.97
RDH13-223	ENST00000610356	MUC19	Q7Z5P9	8384 aa		2.52	□□□□□ -2.01
RDH13-223	ENST00000610356	MUC16	Q8WXI7	14507 aa		1.79	□□□□□ -2.12

Retrieved 77 of 20,778 RNA–protein pairs in 131.4 ms