RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 COA5Q86WW8 74 aa5.7□□□□□ -1.5
CHMP4A-211ENST00000609024 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
CHMP4A-211ENST00000609024 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
CHMP4A-211ENST00000609024 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
CHMP4A-211ENST00000609024 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
CHMP4A-211ENST00000609024 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
CHMP4A-211ENST00000609024 A0A1B0GV90 55 aa5.61□□□□□ -1.51
CHMP4A-211ENST00000609024 A8MU10 97 aa5.54□□□□□ -1.52
CHMP4A-211ENST00000609024 SERP2Q8N6R1 65 aa5.52□□□□□ -1.53
CHMP4A-211ENST00000609024 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
CHMP4A-211ENST00000609024 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-211ENST00000609024 A0A1B0GU69 56 aa5.5□□□□□ -1.53
CHMP4A-211ENST00000609024 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
CHMP4A-211ENST00000609024 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
CHMP4A-211ENST00000609024 K7ERU9 68 aa5.36□□□□□ -1.55
CHMP4A-211ENST00000609024 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-211ENST00000609024 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
CHMP4A-211ENST00000609024 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
CHMP4A-211ENST00000609024 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
CHMP4A-211ENST00000609024 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
CHMP4A-211ENST00000609024 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
CHMP4A-211ENST00000609024 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
CHMP4A-211ENST00000609024 MT1AP04731 61 aa5.19□□□□□ -1.58
CHMP4A-211ENST00000609024 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
CHMP4A-211ENST00000609024 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
CHMP4A-211ENST00000609024 H7BZZ5 65 aa5.16□□□□□ -1.58
CHMP4A-211ENST00000609024 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
CHMP4A-211ENST00000609024 COX7CP15954 63 aa5.15□□□□□ -1.59
CHMP4A-211ENST00000609024 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
CHMP4A-211ENST00000609024 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
CHMP4A-211ENST00000609024 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
CHMP4A-211ENST00000609024 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CHMP4A-211ENST00000609024 UQCR11O14957 56 aa4.98□□□□□ -1.61
CHMP4A-211ENST00000609024 PCP4P48539 62 aa4.98□□□□□ -1.61
CHMP4A-211ENST00000609024 K7ERS5 55 aa4.93□□□□□ -1.62
CHMP4A-211ENST00000609024 LINC01558Q9Y6Z2 57 aa4.92□□□□□ -1.62
CHMP4A-211ENST00000609024 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
CHMP4A-211ENST00000609024 MT3P25713 68 aa4.82□□□□□ -1.64
CHMP4A-211ENST00000609024 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
CHMP4A-211ENST00000609024 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
CHMP4A-211ENST00000609024 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
CHMP4A-211ENST00000609024 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.66
CHMP4A-211ENST00000609024 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
CHMP4A-211ENST00000609024 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
CHMP4A-211ENST00000609024 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-211ENST00000609024 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
CHMP4A-211ENST00000609024 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
CHMP4A-211ENST00000609024 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
CHMP4A-211ENST00000609024 Q1T7F1 81 aa4.43□□□□□ -1.7
CHMP4A-211ENST00000609024 PSPHP1O15172 72 aa4.42□□□□□ -1.7
CHMP4A-211ENST00000609024 TMEM258P61165 79 aa4.41□□□□□ -1.7
CHMP4A-211ENST00000609024 ROMO1P60602 79 aa4.39□□□□□ -1.71
CHMP4A-211ENST00000609024 V9GYY9 64 aa4.37□□□□□ -1.71
CHMP4A-211ENST00000609024 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
CHMP4A-211ENST00000609024 A6NED7 52 aa4.28□□□□□ -1.72
CHMP4A-211ENST00000609024 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CHMP4A-211ENST00000609024 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
CHMP4A-211ENST00000609024 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
CHMP4A-211ENST00000609024 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
CHMP4A-211ENST00000609024 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
CHMP4A-211ENST00000609024 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
CHMP4A-211ENST00000609024 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-211ENST00000609024 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CHMP4A-211ENST00000609024 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
CHMP4A-211ENST00000609024 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
CHMP4A-211ENST00000609024 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
CHMP4A-211ENST00000609024 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
CHMP4A-211ENST00000609024 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CHMP4A-211ENST00000609024 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
CHMP4A-211ENST00000609024 PMAIP1Q13794 54 aa3.01□□□□□ -1.93
CHMP4A-211ENST00000609024 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
CHMP4A-211ENST00000609024 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CHMP4A-211ENST00000609024 KTN1-AS1Q86SY8 53 aa2.63□□□□□ -1.99
CHMP4A-211ENST00000609024 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
CHMP4A-211ENST00000609024 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
CHMP4A-211ENST00000609024 PRM1P04553 51 aa2.2□□□□□ -2.06
CHMP4A-211ENST00000609024 INE1O15225 51 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 210.7 ms