RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 K7ERS5 55 aa6.73□□□□□ -1.33
CTSA-217ENST00000607482 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
CTSA-217ENST00000607482 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
CTSA-217ENST00000607482 V9GYY9 64 aa6.65□□□□□ -1.34
CTSA-217ENST00000607482 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
CTSA-217ENST00000607482 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
CTSA-217ENST00000607482 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
CTSA-217ENST00000607482 MT4P47944 62 aa6.62□□□□□ -1.35
CTSA-217ENST00000607482 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
CTSA-217ENST00000607482 PSPHP1O15172 72 aa6.6□□□□□ -1.35
CTSA-217ENST00000607482 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
CTSA-217ENST00000607482 Q1T7F1 81 aa6.5□□□□□ -1.37
CTSA-217ENST00000607482 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
CTSA-217ENST00000607482 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
CTSA-217ENST00000607482 A6NED7 52 aa6.42□□□□□ -1.38
CTSA-217ENST00000607482 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
CTSA-217ENST00000607482 PCP4P48539 62 aa6.4□□□□□ -1.38
CTSA-217ENST00000607482 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
CTSA-217ENST00000607482 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
CTSA-217ENST00000607482 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
CTSA-217ENST00000607482 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
CTSA-217ENST00000607482 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
CTSA-217ENST00000607482 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
CTSA-217ENST00000607482 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
CTSA-217ENST00000607482 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
CTSA-217ENST00000607482 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
CTSA-217ENST00000607482 ROMO1P60602 79 aa6.15□□□□□ -1.42
CTSA-217ENST00000607482 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
CTSA-217ENST00000607482 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
CTSA-217ENST00000607482 KRTAP20-2Q3LI61 65 aa6.11□□□□□ -1.43
CTSA-217ENST00000607482 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
CTSA-217ENST00000607482 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
CTSA-217ENST00000607482 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CTSA-217ENST00000607482 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.46
CTSA-217ENST00000607482 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
CTSA-217ENST00000607482 MT1AP04731 61 aa5.81□□□□□ -1.48
CTSA-217ENST00000607482 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
CTSA-217ENST00000607482 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
CTSA-217ENST00000607482 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CTSA-217ENST00000607482 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
CTSA-217ENST00000607482 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
CTSA-217ENST00000607482 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
CTSA-217ENST00000607482 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
CTSA-217ENST00000607482 MT3P25713 68 aa5.37□□□□□ -1.55
CTSA-217ENST00000607482 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CTSA-217ENST00000607482 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
CTSA-217ENST00000607482 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
CTSA-217ENST00000607482 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
CTSA-217ENST00000607482 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
CTSA-217ENST00000607482 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
CTSA-217ENST00000607482 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
CTSA-217ENST00000607482 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
CTSA-217ENST00000607482 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
CTSA-217ENST00000607482 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CTSA-217ENST00000607482 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
CTSA-217ENST00000607482 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
CTSA-217ENST00000607482 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
CTSA-217ENST00000607482 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
CTSA-217ENST00000607482 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
CTSA-217ENST00000607482 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
CTSA-217ENST00000607482 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
CTSA-217ENST00000607482 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
CTSA-217ENST00000607482 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
CTSA-217ENST00000607482 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
CTSA-217ENST00000607482 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CTSA-217ENST00000607482 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
CTSA-217ENST00000607482 LCE1FQ5T754 118 aa4□□□□□ -1.77
CTSA-217ENST00000607482 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
CTSA-217ENST00000607482 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
CTSA-217ENST00000607482 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
CTSA-217ENST00000607482 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
CTSA-217ENST00000607482 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
CTSA-217ENST00000607482 PRM1P04553 51 aa3.14□□□□□ -1.91
CTSA-217ENST00000607482 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CTSA-217ENST00000607482 INE1O15225 51 aa3□□□□□ -1.93
CTSA-217ENST00000607482 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
CTSA-217ENST00000607482 H3BS24 57 aa2.44□□□□□ -2.02
CTSA-217ENST00000607482 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 217.9 ms