RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 MT1LQ93083 61 aa5.56□□□□□ -1.52
CTSA-214ENST00000606788 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
CTSA-214ENST00000606788 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
CTSA-214ENST00000606788 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
CTSA-214ENST00000606788 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
CTSA-214ENST00000606788 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
CTSA-214ENST00000606788 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
CTSA-214ENST00000606788 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
CTSA-214ENST00000606788 MT1GP13640 62 aa5.34□□□□□ -1.56
CTSA-214ENST00000606788 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
CTSA-214ENST00000606788 MT1MQ8N339 61 aa5.27□□□□□ -1.57
CTSA-214ENST00000606788 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
CTSA-214ENST00000606788 INE1O15225 51 aa5.12□□□□□ -1.59
CTSA-214ENST00000606788 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
CTSA-214ENST00000606788 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
CTSA-214ENST00000606788 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
CTSA-214ENST00000606788 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
CTSA-214ENST00000606788 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
CTSA-214ENST00000606788 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CTSA-214ENST00000606788 SPRR2EP22531 72 aa4.97□□□□□ -1.61
CTSA-214ENST00000606788 SPRR2BP35325 72 aa4.97□□□□□ -1.61
CTSA-214ENST00000606788 SPRR2AP35326 72 aa4.97□□□□□ -1.61
CTSA-214ENST00000606788 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.61
CTSA-214ENST00000606788 LCE3BQ5TA77 95 aa4.9□□□□□ -1.62
CTSA-214ENST00000606788 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
CTSA-214ENST00000606788 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
CTSA-214ENST00000606788 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
CTSA-214ENST00000606788 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
CTSA-214ENST00000606788 SPRR2DP22532 72 aa4.74□□□□□ -1.65
CTSA-214ENST00000606788 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
CTSA-214ENST00000606788 MT1AP04731 61 aa4.61□□□□□ -1.67
CTSA-214ENST00000606788 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
CTSA-214ENST00000606788 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
CTSA-214ENST00000606788 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
CTSA-214ENST00000606788 NEBP20929 6669 aa4.49□□□□□ -1.69
CTSA-214ENST00000606788 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
CTSA-214ENST00000606788 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
CTSA-214ENST00000606788 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
CTSA-214ENST00000606788 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
CTSA-214ENST00000606788 MT4P47944 62 aa4.32□□□□□ -1.72
CTSA-214ENST00000606788 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
CTSA-214ENST00000606788 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CTSA-214ENST00000606788 MT3P25713 68 aa4.18□□□□□ -1.74
CTSA-214ENST00000606788 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CTSA-214ENST00000606788 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CTSA-214ENST00000606788 PRM1P04553 51 aa4.06□□□□□ -1.76
CTSA-214ENST00000606788 LCE1DQ5T752 114 aa4□□□□□ -1.77
CTSA-214ENST00000606788 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
CTSA-214ENST00000606788 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
CTSA-214ENST00000606788 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
CTSA-214ENST00000606788 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CTSA-214ENST00000606788 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
CTSA-214ENST00000606788 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
CTSA-214ENST00000606788 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
CTSA-214ENST00000606788 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
CTSA-214ENST00000606788 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
CTSA-214ENST00000606788 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
CTSA-214ENST00000606788 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
CTSA-214ENST00000606788 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
CTSA-214ENST00000606788 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
CTSA-214ENST00000606788 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
CTSA-214ENST00000606788 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CTSA-214ENST00000606788 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
CTSA-214ENST00000606788 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
CTSA-214ENST00000606788 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
CTSA-214ENST00000606788 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
CTSA-214ENST00000606788 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
CTSA-214ENST00000606788 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CTSA-214ENST00000606788 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
CTSA-214ENST00000606788 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
CTSA-214ENST00000606788 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
CTSA-214ENST00000606788 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
CTSA-214ENST00000606788 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
CTSA-214ENST00000606788 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
CTSA-214ENST00000606788 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CTSA-214ENST00000606788 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CTSA-214ENST00000606788 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CTSA-214ENST00000606788 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms