RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
UBE3B-213ENST00000605142 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
UBE3B-213ENST00000605142 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
UBE3B-213ENST00000605142 UQCR11O14957 56 aa4.59□□□□□ -1.67
UBE3B-213ENST00000605142 PSPHP1O15172 72 aa4.58□□□□□ -1.68
UBE3B-213ENST00000605142 V9GYY9 64 aa4.55□□□□□ -1.68
UBE3B-213ENST00000605142 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
UBE3B-213ENST00000605142 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
UBE3B-213ENST00000605142 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
UBE3B-213ENST00000605142 Q1T7F1 81 aa4.51□□□□□ -1.69
UBE3B-213ENST00000605142 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
UBE3B-213ENST00000605142 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
UBE3B-213ENST00000605142 MT1EP04732 61 aa4.5□□□□□ -1.69
UBE3B-213ENST00000605142 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
UBE3B-213ENST00000605142 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
UBE3B-213ENST00000605142 TNP1P09430 55 aa4.47□□□□□ -1.69
UBE3B-213ENST00000605142 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
UBE3B-213ENST00000605142 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
UBE3B-213ENST00000605142 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
UBE3B-213ENST00000605142 A6NED7 52 aa4.43□□□□□ -1.7
UBE3B-213ENST00000605142 K7ERS5 55 aa4.42□□□□□ -1.7
UBE3B-213ENST00000605142 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
UBE3B-213ENST00000605142 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
UBE3B-213ENST00000605142 MT4P47944 62 aa4.39□□□□□ -1.71
UBE3B-213ENST00000605142 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
UBE3B-213ENST00000605142 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
UBE3B-213ENST00000605142 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
UBE3B-213ENST00000605142 MT1GP13640 62 aa4.34□□□□□ -1.71
UBE3B-213ENST00000605142 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
UBE3B-213ENST00000605142 MT1LQ93083 61 aa4.3□□□□□ -1.72
UBE3B-213ENST00000605142 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
UBE3B-213ENST00000605142 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
UBE3B-213ENST00000605142 MT1MQ8N339 61 aa4.28□□□□□ -1.72
UBE3B-213ENST00000605142 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
UBE3B-213ENST00000605142 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
UBE3B-213ENST00000605142 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
UBE3B-213ENST00000605142 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
UBE3B-213ENST00000605142 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
UBE3B-213ENST00000605142 ROMO1P60602 79 aa4.14□□□□□ -1.75
UBE3B-213ENST00000605142 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
UBE3B-213ENST00000605142 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
UBE3B-213ENST00000605142 MT3P25713 68 aa4.04□□□□□ -1.76
UBE3B-213ENST00000605142 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
UBE3B-213ENST00000605142 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
UBE3B-213ENST00000605142 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
UBE3B-213ENST00000605142 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
UBE3B-213ENST00000605142 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
UBE3B-213ENST00000605142 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
UBE3B-213ENST00000605142 MUC5ACP98088 5654 aa3.84□□□□□ -1.8
UBE3B-213ENST00000605142 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
UBE3B-213ENST00000605142 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
UBE3B-213ENST00000605142 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
UBE3B-213ENST00000605142 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
UBE3B-213ENST00000605142 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
UBE3B-213ENST00000605142 MT1AP04731 61 aa3.68□□□□□ -1.82
UBE3B-213ENST00000605142 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
UBE3B-213ENST00000605142 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
UBE3B-213ENST00000605142 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
UBE3B-213ENST00000605142 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
UBE3B-213ENST00000605142 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
UBE3B-213ENST00000605142 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
UBE3B-213ENST00000605142 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
UBE3B-213ENST00000605142 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
UBE3B-213ENST00000605142 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
UBE3B-213ENST00000605142 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
UBE3B-213ENST00000605142 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
UBE3B-213ENST00000605142 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
UBE3B-213ENST00000605142 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
UBE3B-213ENST00000605142 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
UBE3B-213ENST00000605142 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
UBE3B-213ENST00000605142 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
UBE3B-213ENST00000605142 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
UBE3B-213ENST00000605142 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
UBE3B-213ENST00000605142 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
UBE3B-213ENST00000605142 PRM1P04553 51 aa2.16□□□□□ -2.06
UBE3B-213ENST00000605142 INE1O15225 51 aa2.14□□□□□ -2.07
UBE3B-213ENST00000605142 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
UBE3B-213ENST00000605142 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 56.8 ms