RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ATP5EP56381 51 aaPredicted RBP3.77□□□□□ -1.81
TUBE1-210ENST00000604967 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
TUBE1-210ENST00000604967 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
TUBE1-210ENST00000604967 TNP1P09430 55 aa3.72□□□□□ -1.81
TUBE1-210ENST00000604967 TMEM258P61165 79 aa3.71□□□□□ -1.82
TUBE1-210ENST00000604967 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
TUBE1-210ENST00000604967 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
TUBE1-210ENST00000604967 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
TUBE1-210ENST00000604967 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
TUBE1-210ENST00000604967 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
TUBE1-210ENST00000604967 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
TUBE1-210ENST00000604967 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
TUBE1-210ENST00000604967 UQCR11O14957 56 aa3.63□□□□□ -1.83
TUBE1-210ENST00000604967 MT4P47944 62 aa3.62□□□□□ -1.83
TUBE1-210ENST00000604967 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
TUBE1-210ENST00000604967 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
TUBE1-210ENST00000604967 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
TUBE1-210ENST00000604967 PSPHP1O15172 72 aa3.56□□□□□ -1.84
TUBE1-210ENST00000604967 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
TUBE1-210ENST00000604967 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
TUBE1-210ENST00000604967 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.85
TUBE1-210ENST00000604967 Q1T7F1 81 aa3.52□□□□□ -1.85
TUBE1-210ENST00000604967 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
TUBE1-210ENST00000604967 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
TUBE1-210ENST00000604967 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
TUBE1-210ENST00000604967 V9GYY9 64 aa3.43□□□□□ -1.86
TUBE1-210ENST00000604967 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
TUBE1-210ENST00000604967 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
TUBE1-210ENST00000604967 PCP4P48539 62 aa3.4□□□□□ -1.87
TUBE1-210ENST00000604967 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
TUBE1-210ENST00000604967 K7ERS5 55 aa3.38□□□□□ -1.87
TUBE1-210ENST00000604967 A6NED7 52 aa3.37□□□□□ -1.87
TUBE1-210ENST00000604967 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
TUBE1-210ENST00000604967 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
TUBE1-210ENST00000604967 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
TUBE1-210ENST00000604967 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
TUBE1-210ENST00000604967 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
TUBE1-210ENST00000604967 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
TUBE1-210ENST00000604967 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
TUBE1-210ENST00000604967 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
TUBE1-210ENST00000604967 ROMO1P60602 79 aa3.28□□□□□ -1.88
TUBE1-210ENST00000604967 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
TUBE1-210ENST00000604967 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
TUBE1-210ENST00000604967 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
TUBE1-210ENST00000604967 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
TUBE1-210ENST00000604967 MT1AP04731 61 aa3.22□□□□□ -1.89
TUBE1-210ENST00000604967 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
TUBE1-210ENST00000604967 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
TUBE1-210ENST00000604967 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
TUBE1-210ENST00000604967 MT3P25713 68 aa2.9□□□□□ -1.95
TUBE1-210ENST00000604967 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
TUBE1-210ENST00000604967 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
TUBE1-210ENST00000604967 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
TUBE1-210ENST00000604967 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
TUBE1-210ENST00000604967 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
TUBE1-210ENST00000604967 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
TUBE1-210ENST00000604967 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
TUBE1-210ENST00000604967 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
TUBE1-210ENST00000604967 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
TUBE1-210ENST00000604967 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
TUBE1-210ENST00000604967 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
TUBE1-210ENST00000604967 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
TUBE1-210ENST00000604967 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
TUBE1-210ENST00000604967 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
TUBE1-210ENST00000604967 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
TUBE1-210ENST00000604967 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
TUBE1-210ENST00000604967 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TUBE1-210ENST00000604967 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
TUBE1-210ENST00000604967 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
TUBE1-210ENST00000604967 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
TUBE1-210ENST00000604967 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
TUBE1-210ENST00000604967 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
TUBE1-210ENST00000604967 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
TUBE1-210ENST00000604967 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
TUBE1-210ENST00000604967 PRM1P04553 51 aa1.71□□□□□ -2.14
TUBE1-210ENST00000604967 INE1O15225 51 aa1.57□□□□□ -2.16
TUBE1-210ENST00000604967 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TUBE1-210ENST00000604967 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 121.3 ms