RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
CCDC12-211ENST00000604367 MT1LQ93083 61 aa5.3□□□□□ -1.56
CCDC12-211ENST00000604367 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CCDC12-211ENST00000604367 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
CCDC12-211ENST00000604367 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
CCDC12-211ENST00000604367 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.58
CCDC12-211ENST00000604367 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
CCDC12-211ENST00000604367 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
CCDC12-211ENST00000604367 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
CCDC12-211ENST00000604367 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
CCDC12-211ENST00000604367 MT1GP13640 62 aa5.04□□□□□ -1.6
CCDC12-211ENST00000604367 MT1MQ8N339 61 aa5.04□□□□□ -1.6
CCDC12-211ENST00000604367 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
CCDC12-211ENST00000604367 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
CCDC12-211ENST00000604367 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
CCDC12-211ENST00000604367 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
CCDC12-211ENST00000604367 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
CCDC12-211ENST00000604367 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
CCDC12-211ENST00000604367 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
CCDC12-211ENST00000604367 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.64
CCDC12-211ENST00000604367 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.64
CCDC12-211ENST00000604367 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.64
CCDC12-211ENST00000604367 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
CCDC12-211ENST00000604367 SPRR2EP22531 72 aa4.75□□□□□ -1.65
CCDC12-211ENST00000604367 SPRR2BP35325 72 aa4.75□□□□□ -1.65
CCDC12-211ENST00000604367 SPRR2AP35326 72 aa4.75□□□□□ -1.65
CCDC12-211ENST00000604367 NEBP20929 6669 aa4.74□□□□□ -1.65
CCDC12-211ENST00000604367 SPRR2DP22532 72 aa4.57□□□□□ -1.68
CCDC12-211ENST00000604367 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CCDC12-211ENST00000604367 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
CCDC12-211ENST00000604367 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
CCDC12-211ENST00000604367 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CCDC12-211ENST00000604367 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
CCDC12-211ENST00000604367 MT1AP04731 61 aa4.46□□□□□ -1.7
CCDC12-211ENST00000604367 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
CCDC12-211ENST00000604367 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
CCDC12-211ENST00000604367 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
CCDC12-211ENST00000604367 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
CCDC12-211ENST00000604367 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
CCDC12-211ENST00000604367 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CCDC12-211ENST00000604367 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CCDC12-211ENST00000604367 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
CCDC12-211ENST00000604367 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
CCDC12-211ENST00000604367 MT3P25713 68 aa4.03□□□□□ -1.76
CCDC12-211ENST00000604367 MT4P47944 62 aa4.03□□□□□ -1.76
CCDC12-211ENST00000604367 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CCDC12-211ENST00000604367 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
CCDC12-211ENST00000604367 LCE4AQ5TA78 99 aa4□□□□□ -1.77
CCDC12-211ENST00000604367 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
CCDC12-211ENST00000604367 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
CCDC12-211ENST00000604367 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
CCDC12-211ENST00000604367 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
CCDC12-211ENST00000604367 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CCDC12-211ENST00000604367 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
CCDC12-211ENST00000604367 PRM1P04553 51 aa3.72□□□□□ -1.81
CCDC12-211ENST00000604367 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
CCDC12-211ENST00000604367 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
CCDC12-211ENST00000604367 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
CCDC12-211ENST00000604367 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
CCDC12-211ENST00000604367 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CCDC12-211ENST00000604367 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
CCDC12-211ENST00000604367 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
CCDC12-211ENST00000604367 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
CCDC12-211ENST00000604367 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
CCDC12-211ENST00000604367 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
CCDC12-211ENST00000604367 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
CCDC12-211ENST00000604367 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
CCDC12-211ENST00000604367 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CCDC12-211ENST00000604367 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
CCDC12-211ENST00000604367 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
CCDC12-211ENST00000604367 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
CCDC12-211ENST00000604367 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
CCDC12-211ENST00000604367 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
CCDC12-211ENST00000604367 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
CCDC12-211ENST00000604367 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CCDC12-211ENST00000604367 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
CCDC12-211ENST00000604367 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
CCDC12-211ENST00000604367 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms