RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
LYSMD4-211ENST00000604213 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
LYSMD4-211ENST00000604213 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.57
LYSMD4-211ENST00000604213 MT1LQ93083 61 aa5.19□□□□□ -1.58
LYSMD4-211ENST00000604213 MT1EP04732 61 aa5.15□□□□□ -1.59
LYSMD4-211ENST00000604213 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
LYSMD4-211ENST00000604213 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
LYSMD4-211ENST00000604213 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
LYSMD4-211ENST00000604213 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
LYSMD4-211ENST00000604213 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
LYSMD4-211ENST00000604213 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
LYSMD4-211ENST00000604213 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
LYSMD4-211ENST00000604213 MT1GP13640 62 aa4.87□□□□□ -1.63
LYSMD4-211ENST00000604213 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
LYSMD4-211ENST00000604213 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
LYSMD4-211ENST00000604213 MT1MQ8N339 61 aa4.79□□□□□ -1.64
LYSMD4-211ENST00000604213 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
LYSMD4-211ENST00000604213 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
LYSMD4-211ENST00000604213 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
LYSMD4-211ENST00000604213 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
LYSMD4-211ENST00000604213 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
LYSMD4-211ENST00000604213 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
LYSMD4-211ENST00000604213 KRTAP6-3Q3LI67 103 aa4.65□□□□□ -1.67
LYSMD4-211ENST00000604213 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
LYSMD4-211ENST00000604213 NEBP20929 6669 aa4.57□□□□□ -1.68
LYSMD4-211ENST00000604213 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
LYSMD4-211ENST00000604213 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
LYSMD4-211ENST00000604213 MT1AP04731 61 aa4.5□□□□□ -1.69
LYSMD4-211ENST00000604213 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
LYSMD4-211ENST00000604213 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
LYSMD4-211ENST00000604213 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
LYSMD4-211ENST00000604213 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
LYSMD4-211ENST00000604213 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
LYSMD4-211ENST00000604213 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
LYSMD4-211ENST00000604213 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
LYSMD4-211ENST00000604213 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
LYSMD4-211ENST00000604213 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
LYSMD4-211ENST00000604213 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
LYSMD4-211ENST00000604213 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
LYSMD4-211ENST00000604213 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
LYSMD4-211ENST00000604213 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
LYSMD4-211ENST00000604213 PRM1P04553 51 aa4.28□□□□□ -1.72
LYSMD4-211ENST00000604213 SPRR2EP22531 72 aa4.13□□□□□ -1.75
LYSMD4-211ENST00000604213 SPRR2BP35325 72 aa4.13□□□□□ -1.75
LYSMD4-211ENST00000604213 SPRR2AP35326 72 aa4.13□□□□□ -1.75
LYSMD4-211ENST00000604213 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
LYSMD4-211ENST00000604213 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
LYSMD4-211ENST00000604213 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
LYSMD4-211ENST00000604213 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
LYSMD4-211ENST00000604213 SPRR2DP22532 72 aa4□□□□□ -1.77
LYSMD4-211ENST00000604213 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
LYSMD4-211ENST00000604213 MT3P25713 68 aa3.87□□□□□ -1.79
LYSMD4-211ENST00000604213 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
LYSMD4-211ENST00000604213 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
LYSMD4-211ENST00000604213 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
LYSMD4-211ENST00000604213 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
LYSMD4-211ENST00000604213 MT4P47944 62 aa3.51□□□□□ -1.85
LYSMD4-211ENST00000604213 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
LYSMD4-211ENST00000604213 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
LYSMD4-211ENST00000604213 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
LYSMD4-211ENST00000604213 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
LYSMD4-211ENST00000604213 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
LYSMD4-211ENST00000604213 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
LYSMD4-211ENST00000604213 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
LYSMD4-211ENST00000604213 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.92
LYSMD4-211ENST00000604213 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
LYSMD4-211ENST00000604213 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
LYSMD4-211ENST00000604213 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
LYSMD4-211ENST00000604213 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
LYSMD4-211ENST00000604213 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
LYSMD4-211ENST00000604213 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
LYSMD4-211ENST00000604213 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
LYSMD4-211ENST00000604213 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
LYSMD4-211ENST00000604213 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
LYSMD4-211ENST00000604213 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
LYSMD4-211ENST00000604213 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
LYSMD4-211ENST00000604213 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
LYSMD4-211ENST00000604213 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 41.6 ms